RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SLC44A5Q8NCS7 719 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CYP2C9P11712 490 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 MUTP22033 750 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 ME2P23368 584 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 GUCA1AP43080 201 aaPredicted RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 NR1H2P55055 460 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 SNRNP35Q16560 246 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 DGKDQ16760 1214 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 IPMKQ8NFU5 416 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 HBP1O60381 514 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 RNASEH1O60930 286 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 TDP2O95551 362 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 OR1G1P47890 313 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 SGO1Q5FBB7 561 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 AMER2Q8N7J2 671 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 TMEM169Q96HH4 297 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 OXNAD1Q96HP4 312 aaPredicted RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 APOL5Q9BWW9 433 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 NT5C1AQ9BXI3 368 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 SHCBP1LQ9BZQ2 653 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 ARMC7Q9H6L4 198 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 RPS6KB2Q9UBS0 482 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 UBE2QL1A1L167 161 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 FAM47E-STBD1D6RA91 191 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 TEX28O15482 410 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 VCLP18206 1134 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 MSH3P20585 1137 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 CDK20Q8IZL9 346 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 TSEN34Q9BSV6 310 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 CDC42EP4Q9H3Q1 356 aaKnown RBP13.21□□□□□ -0.29
SMC4-202ENST00000357388 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SMC4-202ENST00000357388 CCDC182A6NF36 153 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 ZNF682O95780 498 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 EGFRP00533 1210 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 SERPINE1P05121 402 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 ALDH7A1P49419 539 aaKnown RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 BCAP31P51572 246 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 ITGADQ13349 1161 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 NEDD8Q15843 81 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 SAMD4BQ5PRF9 694 aaKnown RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 ZCCHC8Q6NZY4 707 aaKnown RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 ZNF554Q86TJ5 538 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 PACS2Q86VP3 889 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 CHSY1Q86X52 802 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 SYTL1Q8IYJ3 562 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 CENPIQ92674 756 aaPredicted RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.3
SMC4-202ENST00000357388 POLD4Q9HCU8 107 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 TCF7L2Q9NQB0 619 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 MAGI2Q86UL8 1455 aa13.21□□□□□ -0.3
SMC4-202ENST00000357388 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 NPR3P17342 541 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 MZF1P28698 734 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 FEN1P39748 380 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 PWP1Q13610 501 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 BAATQ14032 418 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 CLEC16AQ2KHT3 1053 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ATP6V0D2Q8N8Y2 350 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 L3MBTL3Q96JM7 780 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 PHACTR1Q9C0D0 580 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 KLHL28Q9NXS3 571 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 PSMG1O95456 288 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CLTBP09497 229 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 IRF1P10914 325 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 POU1F1P28069 291 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 KCNJ1P48048 391 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CSE1LP55060 971 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 QPRTQ15274 297 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NDUFAF6Q330K2 333 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 PEG10Q86TG7 708 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CPVLQ9H3G5 476 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■□□ 17.5
SMC4-202ENST00000357388 COMMD9Q9P000 198 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CCDC162PA2VCL2 907 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 HK2P52789 917 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 TRAP1Q12931 704 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 STK4Q13043 487 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ZNF846Q147U1 533 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CCL15Q16663 113 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms