RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TASP1Q9H6P5 420 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ZNF395Q9H8N7 513 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ETNK2Q9NVF9 386 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 MRPL42Q9Y6G3 142 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 KIAA1551Q9HCM1 1747 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 PRR5-ARHGAP8B1AHC4 643 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SPATA31C2B4DYI2 1134 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 E7ENQ6 273 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 GOLGA8TH3BQL2 631 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 DCXO43602 365 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 LGR5O75473 907 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 KLHL2O95198 593 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 MGAT1P26572 445 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 BAG6P46379 1132 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ARHGAP8P85298 464 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 BLMHQ13867 455 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 PDK2Q15119 407 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CYTH1Q15438 398 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TRMT5Q32P41 509 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 RNF220Q5VTB9 566 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 IL31Q6EBC2 164 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 KRT80Q6KB66 452 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 APOBEC3FQ8IUX4 373 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 HACE1Q8IYU2 909 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 USP6NLQ92738 828 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CMTM5Q96DZ9 223 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 NUF2Q9BZD4 464 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 EPS15L1Q9UBC2 864 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SLC39A10Q9ULF5 831 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CORO1CQ9ULV4 474 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 SOX13Q9UN79 622 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 C2CD2Q9Y426 696 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SNCAIPQ9Y6H5 919 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 WASF2Q9Y6W5 498 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 DDX60LQ5H9U9 1706 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 ACKR2O00590 384 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 GLRA3O75311 464 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 EGFRP00533 1210 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 POLBP06746 335 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CCNB1P14635 433 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 AVPR1AP37288 418 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 MLH1P40692 756 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SLC1A6P48664 564 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 GALNTL6Q49A17 601 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 EFHC1Q5JVL4 640 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ARMCX2Q7L311 632 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TDRPQ86YL5 185 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 COLGALT1Q8NBJ5 622 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 RBM15BQ8NDT2 890 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 CEP70Q8NHQ1 597 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 PTPRN2Q92932 1015 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 RNF157Q96PX1 679 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SNRNP25Q9BV90 132 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 MAN1C1Q9NR34 630 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 C20orf96Q9NUD7 363 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 FNDC3AQ9Y2H6 1198 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 LAMB1P07942 1786 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CLUHO75153 1309 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SDR42E2A6NKP2 422 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TTLL13PA6NNM8 815 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 HBP1O60381 514 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 UGT1A9O60656 530 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 WFS1O76024 890 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SLC4A1P02730 911 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 RALBP11234 206 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TCEAL1Q15170 157 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 OASLQ15646 514 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 KIZQ2M2Z5 673 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 EML3Q32P44 896 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ACSBG2Q5FVE4 666 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 PDPK2PQ6A1A2 396 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 CGB2Q6NT52 195 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 IRGCQ6NXR0 463 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 XYLT1Q86Y38 959 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ZNF398Q8TD17 642 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ZNF526Q8TF50 670 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 UCMAQ8WVF2 138 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 SLC44A1Q8WWI5 657 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ABTB1Q969K4 478 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 B3GNT5Q9BYG0 378 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 FRMD8Q9BZ67 464 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 CDT1Q9H211 546 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 FAM96AQ9H5X1 160 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 DHX33Q9H6R0 707 aaKnown RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 UGT1A7Q9HAW7 530 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 UGT1A10Q9HAW8 530 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 UGT1A8Q9HAW9 530 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 KCNK4Q9NYG8 393 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 TAS2R1Q9NYW7 299 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 HMGXB4Q9UGU5 601 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 STAP1Q9ULZ2 295 aa7.06□□□□□ -1.28
RTN4-203ENST00000357376 BARX2Q9UMQ3 279 aaPredicted RBP7.06□□□□□ -1.28
RTN4-203ENST00000357376 COL22A1Q8NFW1 1626 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 PFDN1O60925 122 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms