RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 ATG14Q6ZNE5 492 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 DENND5BQ6ZUT9 1274 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 KIAA0319LQ8IZA0 1049 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 FNIP1Q8TF40 1166 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 TFB1MQ8WVM0 346 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PKD2L1Q9P0L9 805 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZNF541Q9H0D2 1346 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 AVILO75366 819 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 NRLP54845 237 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 MRPS9P82933 396 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 LGSNQ5TDP6 509 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 DCUN1D2Q6PH85 259 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 HPS6Q86YV9 775 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 CMASQ8NFW8 434 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 USP6NLQ92738 828 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 TBC1D22BQ9NU19 505 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 TMX2Q9Y320 296 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 ITM2AO43736 263 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 HSP90AA5PQ58FG0 334 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 XKR9Q5GH70 373 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 RTP4Q96DX8 246 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 SLC2A11Q9BYW1 496 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 AGTPBP1Q9UPW5 1226 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 FAM159BA6NKW6 160 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 UGT1A9O60656 530 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 STBD1O95210 358 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CRTAMO95727 393 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CSH1P0DML2 217 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CSH2P0DML3 217 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 MAGEA3P43357 314 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 EPHB1P54762 984 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ADARP55265 1226 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 SLC13A1Q9BZW2 595 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 UGT1A7Q9HAW7 530 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 UGT1A10Q9HAW8 530 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 UGT1A8Q9HAW9 530 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 RHBDL2Q9NX52 303 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 EMCNQ9ULC0 261 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CEPT1Q9Y6K0 416 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ENDOD1O94919 500 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CCNE2O96020 404 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 RBP3P10745 1247 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 GABRB2P47870 512 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 IDH3AP50213 366 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ADRM1Q16186 407 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 LDHDQ86WU2 507 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 CMTM5Q96DZ9 223 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 SORT1Q99523 831 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 HAPLN2Q9GZV7 340 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 APOBEC2Q9Y235 224 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-201ENST00000357276 ATP6V1G1O75348 118 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 KRT38O76015 456 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 CDH2P19022 906 aaPredicted RBP12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 TNNI1P19237 187 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 NLRP11P59045 1033 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 NOMO1Q15155 1222 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 WDR78Q5VTH9 848 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 FRMD7Q6ZUT3 714 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 DDI1Q8WTU0 396 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 APOL6Q9BWW8 343 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 RIMS3Q9UJD0 308 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.4
SMARCAL1-201ENST00000357276 KAT6AQ92794 2004 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 ARHGAP10A1A4S6 786 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 ATG7O95352 703 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 APOEP02649 317 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 BMPR2Q13873 1038 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 NDUFAF2Q8N183 169 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 GFM2Q969S9 779 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 Q9H521 79 aa12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 DDX18Q9NVP1 670 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-201ENST00000357276 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms