RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TMEM150BA6NC51 233 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 KRT36O76013 467 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 CHRM3P20309 590 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 ACO1P21399 889 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 RIPK1Q13546 671 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 CCDC153Q494R4 210 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 MRNIPQ6NTE8 343 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 OR6Y1Q8NGX8 325 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 SH3TC2Q8TF17 1288 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 LRRC39Q96DD0 335 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 LRMDAQ9H2I8 198 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 F9P00740 461 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 RBP1P09455 135 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 RXRBP28702 533 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 MIPP30301 263 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 GTF2H3Q13889 308 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 PIWIL2Q8TC59 973 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 URGCPQ8TCY9 931 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 PURBQ96QR8 312 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 CORO1CQ9ULV4 474 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
TRAPPC11-202ENST00000357207 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DDHD2O94830 711 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 CYP3A4P08684 503 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 BCAT1P54687 386 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 GLRA4Q5JXX5 417 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 PLEKHA7Q6IQ23 1121 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 RASGEF1CQ8N431 466 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 LMCD1Q9NZU5 365 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 A0A096LPK6 155 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 FAM237BA0A1B0GVD1 139 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 CCDC159P0C7I6 412 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 STAG3L1P0CL83 205 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 ETS1P14921 441 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 VCAM1P19320 739 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 EIF4BP23588 611 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 MARSP56192 900 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 KCTD19Q17RG1 926 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DCAF4L1Q3SXM0 396 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 NOTUMQ6P988 496 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 TNIP2Q8NFZ5 429 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 PWWP2AQ96N64 755 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 ZNF556Q9HAH1 456 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 BTBD7Q9P203 1132 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 VANGL2Q9ULK5 521 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 JCADQ9P266 1359 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 WTIPA6NIX2 430 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 LCA5LO95447 670 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 MT-CO1P00395 513 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 HMBSP08397 361 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 CYP2C9P11712 490 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 NME5P56597 212 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 LACTB2Q53H82 288 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 PTRHD1Q6GMV3 140 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 DDX4Q9NQI0 724 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 AHCYL1O43865 530 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 FMO1Q01740 532 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 NFYCQ13952 458 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 PARP6Q2NL67 630 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SGO1Q5FBB7 561 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 TBCELQ5QJ74 424 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SAE1Q9UBE0 346 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 SALL4Q9UJQ4 1053 aa16.05■□□□□ 0.16
TRAPPC11-202ENST00000357207 C2CD2LO14523 706 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 LIASO43766 372 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 KRT75O95678 551 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 MMRN1Q13201 1228 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 THEMIS2Q5TEJ8 643 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 LRRC38Q5VT99 294 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 SAC3D1A6NKF1 404 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 SLC25A27O95847 323 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 MPOP05164 745 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 FASP25445 335 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 GSTT1P30711 240 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 CDK7P50613 346 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 PLIN5Q00G26 463 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 ROR2Q01974 943 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 CSHL1Q14406 222 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 VPS72Q15906 364 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 ATP13A4Q4VNC1 1196 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 NIPA1Q7RTP0 329 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 TERB1Q8NA31 727 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 LZICQ8WZA0 190 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms