RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PDZK1Q5T2W1 519 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 IQCKQ8N0W5 287 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 APPL2Q8NEU8 664 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 RIBC2Q9H4K1 309 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM216Q9P0N5 145 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 SH3BP4Q9P0V3 963 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 NDUFS3O75489 264 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 CYP1A1P04798 512 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 UMPSP11172 480 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 ANGPTL8Q6UXH0 198 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TDRPQ86YL5 185 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 C8orf59Q8N0T1 100 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 LZTR1Q8N653 840 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 SLC20A1Q8WUM9 679 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TFB1MQ8WVM0 346 aaKnown RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 GREM2Q9H772 168 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 AHSPQ9NZD4 102 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 RPS6KA6Q9UK32 745 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 ASAP1Q9ULH1 1129 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 RIPK2O43353 540 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 ARIH2O95376 493 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 IMPDH2P12268 514 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 GSCP56915 257 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 XKR3Q5GH77 459 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 ALDH16A1Q8IZ83 802 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 KLRC1P26715 233 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 GRK3P35626 688 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 SQLEQ14534 574 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 DENND1BQ6P3S1 775 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 CPXCR1Q8N123 301 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 ACTRT2Q8TDY3 377 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 SDR42E1Q8WUS8 393 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 EGFL8Q99944 293 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 KCTD14Q9BQ13 255 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 SPAG4Q9NPE6 437 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 RGS18Q9NS28 235 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 PRMT7Q9NVM4 692 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-202ENST00000357162 CDH9Q9ULB4 789 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TMED5Q9Y3A6 229 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TLR2O60603 784 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 GCLMP48507 274 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 AP3S2P59780 193 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM47Q9BQJ4 181 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 PCMTD2Q9NV79 361 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 TRHDEQ9UKU6 1024 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 NDUFAF1Q9Y375 327 aa6.76□□□□□ -1.33
VPS13B-202ENST00000357162 CCDC195A0A1B0GUA6 201 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 OXCT1P55809 520 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC74AQ0VAA2 488 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TBC1D10CQ8IV04 446 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PGBD4Q96DM1 585 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 NLRP4Q96MN2 994 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 NT5C1AQ9BXI3 368 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PEX16Q9Y5Y5 336 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF609O15014 1411 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 LCA5LO95447 670 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MZT2AQ6P582 158 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GLMNQ92990 594 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TOP1MTQ969P6 601 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 UBE2E3Q969T4 207 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SYNDIG1Q9H7V2 258 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ARIH1Q9Y4X5 557 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 UBDO15205 165 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RENBPP51606 427 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 NUDT18Q6ZVK8 323 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF557Q8N988 423 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 FAM220BPB1ANY3 271 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 APOC4-APOC2K7ER74 178 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 APOC2P02655 101 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MLH1P40692 756 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 POU4F1Q01851 419 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 FMR1Q06787 632 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF543Q08ER8 600 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF268Q14587 947 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 C2CD6Q53TS8 623 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TBC1D21Q8IYX1 336 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TECPR2O15040 1411 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 KCNN4O15554 427 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TRMUO75648 421 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RAG1P15918 1043 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CRKLP46109 303 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SP4Q02446 784 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GRTP1Q5TC63 336 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RP9Q8TA86 221 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CKAP2Q8WWK9 683 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ITPKCQ96DU7 683 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 EIF2AK1Q9BQI3 630 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SNX9Q9Y5X1 595 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PARNO95453 639 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 NR3C2P08235 984 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PRKAR1AP10644 381 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 OASLQ15646 514 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CABLES1Q8TDN4 633 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MPP4Q96JB8 637 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MCCC1Q96RQ3 725 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RAD18Q9NS91 495 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PKD2L1Q9P0L9 805 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms