RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TBCBQ99426 244 aa4.21□□□□□ -1.73
LIG4-201ENST00000356922 LINC00597Q9H2U6 94 aa4.21□□□□□ -1.73
LIG4-201ENST00000356922 WDR6Q9NNW5 1121 aaKnown RBP4.21□□□□□ -1.73
LIG4-201ENST00000356922 CNGB3Q9NQW8 809 aa4.21□□□□□ -1.73
LIG4-201ENST00000356922 ZDHHC7Q9NXF8 308 aa4.21□□□□□ -1.73
LIG4-201ENST00000356922 PACSIN2Q9UNF0 486 aaPredicted RBP4.21□□□□□ -1.73
LIG4-201ENST00000356922 PPP2R2CQ9Y2T4 447 aa4.21□□□□□ -1.73
LIG4-201ENST00000356922 GOLGA6L7A0A1B0GV03 622 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ANKRD62A6NC57 917 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 SIGLEC16A6NMB1 481 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM72CH0Y354 149 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ARHGAP6O43182 974 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TLR5O60602 858 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 LTFP02788 710 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HMBSP08397 361 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CSH1P0DML2 217 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CSH2P0DML3 217 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 RARGP13631 454 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FCARP24071 287 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MARCKSL1P49006 195 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 IRAK1P51617 712 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HDAC4P56524 1084 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 GPC5P78333 572 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 EFEMP1Q12805 493 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ZNF268Q14587 947 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 STILQ15468 1287 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CDO1Q16878 200 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 KCNT1Q5JUK3 1230 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM78AQ5JUQ0 283 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM72AQ5TYM5 149 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TANGO2Q6ICL3 276 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM72DQ6L9T8 149 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 PARM1Q6UWI2 310 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CCDC149Q6ZUS6 474 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 SLC26A9Q7LBE3 791 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MON1AQ86VX9 555 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM72BQ86X60 149 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ARID3BQ8IVW6 561 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 SIX6OS1Q8N1H7 587 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 PYROXD2Q8N2H3 581 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 NETO2Q8NC67 525 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 C3orf20Q8ND61 904 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MAFAQ8NHW3 353 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 USP13Q92995 863 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 ASIC4Q96FT7 647 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TRMT2BQ96GJ1 504 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 SLC2A13Q96QE2 648 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 NUP85Q9BW27 656 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 SYNCQ9H7C4 482 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TRPC7Q9HCX4 862 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MYO16Q9Y6X6 1858 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MACROD2A1Z1Q3 448 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TRDMT1O14717 391 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 MBTPS2O43462 519 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 BUB1BO60566 1050 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 MOCS3O95396 460 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 IGLV3-25P01717 112 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 H2AFZP0C0S5 128 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 PDGFRAP16234 1089 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ANXA13P27216 316 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HOXA9P31269 272 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TAS2R40P59535 323 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CREMQ03060 361 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CA9Q16790 459 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 SNX30Q5VWJ9 437 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 AADACL2Q6P093 401 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 H2AFVQ71UI9 128 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 GET4Q7L5D6 327 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 TAC4Q86UU9 113 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 DQX1Q8TE96 717 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 CHFRQ96EP1 664 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 NECAB3Q96P71 396 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 CDCA3Q99618 268 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 SFXN1Q9H9B4 322 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CYLDQ9NQC7 956 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TRIM24O15164 1050 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CCP110O43303 1012 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 LRCH4O75427 683 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 OLFM2O95897 454 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HNRNPA1P09651 372 aaKnown RBP eCLIP4.21□□□□□ -1.74
LIG4-201ENST00000356922 CCDC172P0C7W6 258 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HDCP19113 662 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 SGSHP51688 502 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 NME3Q13232 169 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ZC3H12AQ5D1E8 599 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 GPR158Q5T848 1215 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 TRIM68Q6AZZ1 485 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 FAM131BQ86XD5 332 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CCDC185Q8N715 623 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CMASQ8NFW8 434 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 KIAA1524Q8TCG1 905 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 CENPIQ92674 756 aaPredicted RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 HLA-CQ95604 372 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 NPY6RQ99463 290 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 HERPUD2Q9BSE4 406 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 DDX23Q9BUQ8 820 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 PIDD1Q9HB75 910 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 POPDC2Q9HBU9 364 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 ASAH2Q9NR71 780 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms