RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SLC9A3R1O14745 358 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 AIM2O14862 343 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 B3GAT3O94766 335 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 DNAJB2P25686 324 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NOS3P29474 1203 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CCNG1P51959 295 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CYLC2Q14093 348 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 AMHR2Q16671 573 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 LRRC8DQ7L1W4 858 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 VPS33AQ96AX1 596 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 THAP11Q96EK4 314 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PARVBQ9HBI1 364 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 DCDC2Q9UHG0 476 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ZBTB12Q9Y330 459 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF609O15014 1411 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 EIF4E1BA6NMX2 242 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 VDRP11473 427 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 UCHL3P15374 230 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 WEE1P30291 646 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PURAQ00577 322 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CCDC149Q6ZUS6 474 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TRMT11Q7Z4G4 463 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TMEM237Q96Q45 408 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SH3GL1Q99961 368 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM51Q9BSJ1 452 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CNTNAP2Q9UHC6 1331 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 PDZK1P1A8MUH7 402 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TCP11X1B4DZS4 312 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 PLA2G6O60733 806 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TMEM253P0C7T8 217 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CCDC130P13994 396 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 PSMC3P17980 439 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 POLR2EP19388 210 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 IGFBP4P22692 258 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TGFB2P61812 414 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TOMM20Q15388 145 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ALG11Q2TAA5 492 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ATP6AP1LQ52LC2 224 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 GLRA4Q5JXX5 417 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 AGMOQ6ZNB7 445 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ZDHHC15Q96MV8 337 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 MTFR1LQ9H019 292 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 HSD3B7Q9H2F3 369 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 NEK6Q9HC98 313 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SOHLH2Q9NX45 425 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SNX12Q9UMY4 172 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SPTLC1O15269 473 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 NCAM2O15394 837 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CYP7B1O75881 506 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 HPCAL1P37235 193 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 FEN1P39748 380 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 MDH1P40925 334 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 THOP1P52888 689 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 KRR1Q13601 381 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 NOL9Q5SY16 702 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 LONP2Q86WA8 852 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 GINS4Q9BRT9 223 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 DCLK3Q9C098 648 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CCSER1Q9C0I3 900 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 VTI1BQ9UEU0 232 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SNX8Q9Y5X2 465 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 V9GYQ6 96 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 KNDC1Q76NI1 1749 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM13O60858 407 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ALBP02768 609 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF286BP0CG31 522 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SF3B3Q15393 1217 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 LONRF1Q17RB8 773 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 FEZF2Q8TBJ5 459 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 STARD8Q92502 1023 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 FAM210AQ96ND0 272 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 HTATIP2Q9BUP3 242 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 MANSC1Q9H8J5 431 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 LRRC40Q9H9A6 602 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SERHLQ9NQF3 203 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 INTS13Q9NVM9 706 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CPS1P31327 1500 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CABYRO75952 493 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CAMTA2O94983 1202 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 AKR1A1P14550 325 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 PAX3P23760 479 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TALDO1P37837 337 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 AGBL2Q5U5Z8 902 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF572Q7Z3I7 529 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 TERB1Q8NA31 727 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 GMCL1P1Q8NEA9 526 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 FAM45AQ8TCE6 357 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ZKSCAN4Q969J2 545 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 ABCC6O95255 1503 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 MEI4A8MW99 385 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 OGTO15294 1046 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 CST8O60676 142 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 LSM8O95777 96 aaKnown RBP5.69□□□□□ -1.5
PTPRD-202ENST00000356435 NTSP30990 170 aa5.69□□□□□ -1.5
PTPRD-202ENST00000356435 NAB2Q15742 525 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms