RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
RAP1A-201ENST00000356415 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
RAP1A-201ENST00000356415 NPY6RQ99463 290 aa13.77□□□□□ -0.21
RAP1A-201ENST00000356415 ALG6Q9Y672 507 aa13.77□□□□□ -0.21
RAP1A-201ENST00000356415 CAPN6Q9Y6Q1 641 aa13.77□□□□□ -0.21
RAP1A-201ENST00000356415 SYNJ2BP-COX16A0A087WUM0 186 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 GRID2IPA4D2P6 1211 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 DPYSL4O14531 572 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 SPOPO43791 374 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 TRUB2O95900 331 aaKnown RBP13.76□□□□□ -0.21
RAP1A-201ENST00000356415 TUBP50607 506 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 EPHA5P54756 1037 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 GNG11P61952 73 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 NTHL1P78549 312 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 NME3Q13232 169 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 CTC1Q2NKJ3 1217 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 ARHGAP15Q53QZ3 475 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 GPR149Q86SP6 731 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 TMEM150AQ86TG1 271 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 ADAM32Q8TC27 787 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 DQX1Q8TE96 717 aaKnown RBP13.76□□□□□ -0.21
RAP1A-201ENST00000356415 FAM172AQ8WUF8 416 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
RAP1A-201ENST00000356415 TBCBQ99426 244 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 NCAPGQ9BPX3 1015 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 CCSER2Q9H7U1 834 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 TRPC7Q9HCX4 862 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 COX16Q9P0S2 106 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 SFMBT1Q9UHJ3 866 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
RAP1A-201ENST00000356415 ESPNB1AK53 854 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TADA3O75528 432 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TBX18O95935 607 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 F9P00740 461 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 FOSL2P15408 326 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 GJA1P17302 382 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 COMTP21964 271 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MAN1A1P33908 653 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CYP4F8P98187 520 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 DEUP1Q05D60 604 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 ITIH3Q06033 890 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 ZNF252P-AS1Q0IIN9 211 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 EFEMP1Q12805 493 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SKIV2LQ15477 1246 aaKnown RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SH3PXD2AQ5TCZ1 1133 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TXNDC8Q6A555 127 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CC2D1AQ6P1N0 951 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SCYL2Q6P3W7 929 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SYCE2Q6PIF2 218 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SND1Q7KZF4 910 aaKnown RBP eCLIP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 STRADAQ7RTN6 431 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 PEX26Q7Z412 305 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 NIPA2Q8N8Q9 360 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 LRRC57Q8N9N7 239 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 RNF34Q969K3 372 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 ADAM7Q9H2U9 754 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.215e-7■□□□□ 10.4
RAP1A-201ENST00000356415 MARCH2Q9P0N8 246 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CLEC1BQ9P126 229 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 RASAL2Q9UJF2 1139 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 AMFRQ9UKV5 643 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MRPS23Q9Y3D9 190 aaKnown RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 COCHO43405 550 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 PAPLNO95428 1278 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 FTCDO95954 541 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TNNT1P13805 278 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 HDCP19113 662 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TFE3P19532 575 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 RDXP35241 583 aaKnown RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CCR2P41597 374 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 PITX1P78337 314 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 HADHQ16836 314 aaKnown RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MSANTD2Q6P1R3 559 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 KLHDC10Q6PID8 442 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SLFN11Q7Z7L1 901 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MIB1Q86YT6 1006 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SLC35F6Q8N357 371 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MAB21L3Q8N8X9 362 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SHKBP1Q8TBC3 707 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 CENPIQ92674 756 aaPredicted RBP13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SERPINB11Q96P15 392 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SMOC2Q9H3U7 446 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 TMEM51Q9NW97 253 aa13.75□□□□□ -0.21
RAP1A-201ENST00000356415 MDM4O15151 490 aa13.74□□□□□ -0.21
RAP1A-201ENST00000356415 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
RAP1A-201ENST00000356415 TBX10O75333 385 aa13.74□□□□□ -0.21
RAP1A-201ENST00000356415 ENDOD1O94919 500 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms