RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 REXO4Q9GZR2 422 aaKnown RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 JMJD4Q9H9V9 463 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 MBD2Q9UBB5 411 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 ZNRF3Q9ULT6 936 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 CNTNAP5Q8WYK1 1306 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 CNPP09543 421 aaKnown RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 AGKQ53H12 422 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 PHACTR4Q8IZ21 702 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 FAM172AQ8WUF8 416 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TRPC4Q9UBN4 977 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 ZNF70Q9UC06 446 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 SLC24A2Q9UI40 661 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 KIAA1257Q9ULG3 409 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 C2CD2LO14523 706 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 JAK1P23458 1154 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 ATP1A4Q13733 1029 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 MOSPD2Q8NHP6 518 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TRPC4APQ8TEL6 797 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 PIF1Q9H611 641 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 AAASQ9NRG9 546 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 SNX8Q9Y5X2 465 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 NRKQ7Z2Y5 1582 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 ATP6V1G2O95670 118 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TPBGLP0DKB5 382 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 RXRGP48443 463 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 MAD2L1Q13257 205 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TRMT5Q32P41 509 aaKnown RBP15.3■□□□□ 0.04
LMX1B-201ENST00000355497 CDC42EP5Q6NZY7 148 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 SPOCD1Q6ZMY3 1216 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 MTSS1LQ765P7 747 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 CD302Q8IX05 232 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 EID3Q8N140 333 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 FBXO32Q969P5 355 aa15.3■□□□□ 0.04
LMX1B-201ENST00000355497 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KIF1BO60333 1816 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ZBTB7AO95365 584 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 MED26O95402 600 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 PLEKP08567 350 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 SLC2A4P14672 509 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ACO1P21399 889 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 GARTP22102 1010 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ORC1Q13415 861 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 TSNQ15631 228 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KCNT1Q5JUK3 1230 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KYQ8NBH2 561 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 MAGED4Q96JG8 741 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ACOX2Q99424 681 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 CDC42EP4Q9H3Q1 356 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 RXFP1Q9HBX9 757 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 IL12RB1P42701 662 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 DMPKQ09013 629 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KLHL17Q6TDP4 642 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 RIPOR1Q6ZS17 1223 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 CCDC33Q8N5R6 958 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ATP8B4Q8TF62 1192 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KLK14Q9P0G3 267 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 WDR93Q6P2C0 686 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 FAM136AQ96C01 138 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
LMX1B-201ENST00000355497 TMEM114B3SHH9 223 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 BIRC5O15392 142 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 DEFB107AQ8IZN7 70 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 CATSPER2Q96P56 530 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 MAP3K14Q99558 947 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 ADGRE3Q9BY15 652 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 KLHL1Q9NR64 748 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 TBC1D13Q9NVG8 400 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 GPATCH2LQ9NWQ4 482 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 STON1Q9Y6Q2 735 aa15.29■□□□□ 0.04
LMX1B-201ENST00000355497 DSG3P32926 999 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 STX4Q12846 297 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 CACTIN-AS1Q8N1I8 211 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ACTRT1Q8TDG2 376 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ZNF518BQ9C0D4 1074 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 PDE9AO76083 593 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 FBXO21O94952 628 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 MAP3K6O95382 1288 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 NOS3P29474 1203 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 CACNA2D1P54289 1103 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 MPP4Q96JB8 637 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 TRAPPC9Q96Q05 1148 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 APOL4Q9BPW4 351 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ADI1Q9BV57 179 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 DPY30Q9C005 99 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 PHGDHO43175 533 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 PABPC1P11940 636 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RHOAP61586 193 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms