RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 CKMP06732 381 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 TCN1P20061 433 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 PAPOLAP51003 745 aaKnown RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 YWHAHQ04917 246 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 CATSPER1Q8NEC5 780 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 CYP39A1Q9NYL5 469 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 NR2E1Q9Y466 385 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 BANF1O75531 89 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 C16orf89Q6UX73 402 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 CCDC138Q96M89 665 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF518BQ9C0D4 1074 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 FCHO1O14526 889 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 DNAJC6O75061 913 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SLC2A3P11169 496 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LHX1P48742 406 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SLC11A2P49281 568 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LACTB2Q53H82 288 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 DNAJC16Q9Y2G8 782 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 FOXO6A8MYZ6 492 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 F8VP50 259 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 DFFAO00273 331 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 ATP13A4Q4VNC1 1196 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 FRMD8Q9BZ67 464 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 A8MUI8 341 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 CYB561D2O14569 222 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 CELF3Q5SZQ8 465 aaKnown RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SAE1Q9UBE0 346 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 RNASEH1O60930 286 aaKnown RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 ELNP15502 786 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 CTNNB1P35222 781 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 XRCC4Q13426 336 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 PRAMEF19Q5SWL8 479 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 APOPT1Q96IL0 206 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF558Q96NG5 402 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 RNF103-CHMP3A0A140T963 221 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 MEI4A8MW99 385 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 MAP3K13O43283 966 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 POLBP06746 335 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 EFHC1Q5JVL4 640 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 PPM1LQ5SGD2 360 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 TTC27Q6P3X3 843 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 USP33Q8TEY7 942 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SHC3Q92529 594 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 INPP5DQ92835 1189 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 CPB2Q96IY4 423 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 VCPIP1Q96JH7 1222 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-201ENST00000355430 LTBP3Q9NS15 1303 aa12.72□□□□□ -0.37
COLCA1-201ENST00000355430 SOCS7O14512 581 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 FSCN2O14926 492 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 PARNO95453 639 aaKnown RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 GTF2BQ00403 316 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 USP10Q14694 798 aaKnown RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 WDR49Q8IV35 697 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 ATP6V0D2Q8N8Y2 350 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 MYH8P13535 1937 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 NFKBIEO00221 500 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 LIASO43766 372 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 CACNA2D1P54289 1103 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 CCL23P55773 120 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 FBXO32Q969P5 355 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 ANO4Q32M45 955 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms