RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PCDHGC5Q9Y5F6 944 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 PCDHA3Q9Y5H8 950 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 GLRBP48167 497 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 HPCAP84074 193 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CHID1Q9BWS9 393 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 NDUFAF1Q9Y375 327 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 C15orf38-AP3S2A0A0A6YYH1 394 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 ILF2Q12905 390 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 ARPINQ7Z6K5 226 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 BORCS5Q969J3 196 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 OSBPL10Q9BXB5 764 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 WWOXQ9NZC7 414 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 C6orf203Q9P0P8 240 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 KRT36O76013 467 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 LSM8O95777 96 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RXRGP48443 463 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 MRPS22P82650 360 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 EMC2Q15006 297 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 GIPC3Q8TF64 312 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM120BQ96EK7 910 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC25A23Q9BV35 468 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ROGDIQ9GZN7 287 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 POLG2Q9UHN1 485 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 PGM3O95394 542 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZNF682O95780 498 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RRM1P23921 792 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 NME5P56597 212 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 NAB1Q13506 487 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC7A14Q8TBB6 771 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ABCB1P08183 1280 aaPredicted RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 NUDT17P0C025 328 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 TKTP29401 623 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 BROXQ5VW32 411 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 OR7A2PQ8NGA2 310 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ENTPD5O75356 428 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ADRA1DP25100 572 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 C8orf59Q8N0T1 100 aaPredicted RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 FBXW8Q8N3Y1 598 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 BHLHE22Q8NFJ8 381 aaPredicted RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 NMRK1Q9NWW6 199 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 CYP27B1O15528 508 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 DCXO43602 365 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 RARAP10276 462 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 MYL4P12829 197 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 GP5P40197 560 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ELK3P41970 407 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 CDC42EP1Q00587 391 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 PPP4R4Q6NUP7 873 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 STK32CQ86UX6 486 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPATA33Q96N06 139 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 APOL5Q9BWW9 433 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 MOSPD1Q9UJG1 213 aa13.07□□□□□ -0.32
SYNCRIP-201ENST00000355238 NEO1Q92859 1461 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ABCC3O15438 1527 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 MAFGO15525 162 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 CD4P01730 458 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 VAV1P15498 845 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 AUHQ13825 339 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 C16orf86Q6ZW13 317 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZDHHC13Q8IUH4 622 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 UBA3Q8TBC4 463 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZCWPW1Q9H0M4 648 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.06□□□□□ -0.326e-8■■■□□ 19.1
SYNCRIP-201ENST00000355238 NYAP2Q9P242 653 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 DDHD2O94830 711 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 NCALDP61601 193 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TROAPQ12815 778 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 CNTN1Q12860 1018 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms