RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SLC26A11Q86WA9 606 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 SPOCK2Q92563 424 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 APBB2Q92870 758 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 NXF3Q9H4D5 531 aaKnown RBP23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 DCAF8L1A6NGE4 600 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 FAM155BO75949 473 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 UNC5CO95185 931 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 KCNE1P15382 129 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 YWHAZP63104 245 aaKnown RBP23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 SLC18A2Q05940 514 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 MTM1Q13496 603 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 SLC45A4Q5BKX6 768 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 SPDYAQ5MJ70 313 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 DPEP3Q9H4B8 488 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 ZNF180Q9UJW8 692 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 SMIM28A0A1B0GU29 152 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 LPXNO60711 386 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 ADRA1DP25100 572 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 XKR4Q5GH76 650 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 EFHC1Q5JVL4 640 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 TTC39BQ5VTQ0 682 aaPredicted RBP23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 STRADAQ7RTN6 431 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 KBTBD7Q8WVZ9 684 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 DHX35Q9H5Z1 703 aaKnown RBP23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 ETNK1Q9HBU6 452 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 CD248Q9HCU0 757 aa23.1■■□□□ 1.29
NKX2-1-201ENST00000354822 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 IGF2BP3O00425 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 PDGFRBP09619 1106 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 BZW1Q7L1Q6 419 aaKnown RBP23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 OTOAQ7RTW8 1153 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 LRRC6Q86X45 466 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 VPS52Q8N1B4 723 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 APPL2Q8NEU8 664 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 TNIP3Q96KP6 325 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 ZC3H7BQ9UGR2 993 aaKnown RBP23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 AP4E1Q9UPM8 1137 aa23.09■■□□□ 1.29
NKX2-1-201ENST00000354822 AVILO75366 819 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 PIAS1O75925 651 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 APRTP07741 180 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 TROVE2P10155 538 aaKnown RBP eCLIP23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 TPSB2P20231 275 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 ADORA2BP29275 332 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 TAF6P49848 677 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 KCNJ2P63252 427 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 TPSAB1Q15661 275 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 SV2CQ496J9 727 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 CAND1Q86VP6 1230 aaKnown RBP23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 FAM228AQ86W67 206 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 ZNF276Q8N554 614 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 APOPT1Q96IL0 206 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 MANSC1Q9H8J5 431 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 RRAGCQ9HB90 399 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 NOD2Q9HC29 1040 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 KRT37O76014 449 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 LCP1P13796 627 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 CCDC130P13994 396 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 AKAP5P24588 427 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 FAAP100Q0VG06 881 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 LIMS2Q7Z4I7 341 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 CHSY1Q86X52 802 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 PSTKQ8IV42 348 aaKnown RBP23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 C10orf82Q8WW14 230 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 MYLK2Q9H1R3 596 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 BAIAP2L1Q9UHR4 511 aa23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 PIN4Q9Y237 131 aaKnown RBP23.08■■□□□ 1.29
NKX2-1-201ENST00000354822 GOLGA8RI6L899 631 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 ADCY6O43306 1168 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 PRKCHP24723 683 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 SH2D5Q6ZV89 423 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 CCDC110Q8TBZ0 833 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 CFAP36Q96G28 342 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 APOL6Q9BWW8 343 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 POPDC2Q9HBU9 364 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 RCOR3Q9P2K3 495 aaPredicted RBP23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 GNEQ9Y223 722 aaKnown RBP23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 CHKBQ9Y259 395 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 C2CD2LO14523 706 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 HUS1O60921 280 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 DHRS4L1P0CG22 281 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 FGFR1P11362 822 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 LMO2P25791 158 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 NEK3P51956 506 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 SLC8A3P57103 927 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 MFSD10Q14728 455 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 ANKLE1Q8NAG6 615 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 CLEC4CQ8WTT0 213 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 RAB3IPQ96QF0 476 aaPredicted RBP23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 MTMR10Q9NXD2 777 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 TTLL3Q9Y4R7 772 aa23.07■■□□□ 1.28
NKX2-1-201ENST00000354822 HACD1B0YJ81 288 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SNRPAP09012 282 aaKnown RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 FAM163BP0C2L3 166 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 TFE3P19532 575 aaPredicted RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 MATKP42679 507 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SARNPP82979 210 aaKnown RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SNX17Q15036 470 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SYCP2LQ5T4T6 812 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 AGGF1Q8N302 714 aaeCLIP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms