RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MAF1Q9H063 256 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 FAM49AQ9H0Q0 323 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 POPDC2Q9HBU9 364 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SNTG2Q9NY99 539 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SNRPAP09012 282 aaKnown RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SLC26A2P50443 739 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SLC10A2Q12908 348 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 MIEF2Q96C03 454 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 PHACTR1Q9C0D0 580 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SMAPO00193 183 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 GABBR2O75899 941 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 NPTXRO95502 500 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 TPBGLP0DKB5 382 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 HDAC4P56524 1084 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SLC18A2Q05940 514 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 KHDC1Q4VXA5 237 aaKnown RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 UNC5AQ6ZN44 842 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SH2D5Q6ZV89 423 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SESTD1Q86VW0 696 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 ARID3BQ8IVW6 561 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 GPC2Q8N158 579 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 VPS52Q8N1B4 723 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 MCUR1Q96AQ8 359 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 PLAC1Q9HBJ0 212 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 HESX1Q9UBX0 185 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 NME7Q9Y5B8 376 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 SCN1AP35498 2009 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 TSPAN1O60635 241 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 DLDP09622 509 aaKnown RBP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 ESRRAP11474 423 aaPredicted RBP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 CCDC130P13994 396 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 SLC6A3Q01959 620 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 CHI3L2Q15782 390 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 RINLQ6ZS11 566 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 NDRG1Q92597 394 aaKnown RBP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 ZMAT2Q96NC0 199 aaKnown RBP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 TUBGCP4Q9UGJ1 667 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 SLC15A5A6NIM6 579 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 DHRS4L1P0CG22 281 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 ADCYAP1R1P41586 468 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 CDK16Q00536 496 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 BST1Q10588 318 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 RCN2Q14257 317 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 PDK2Q15119 407 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 NDUFAF2Q8N183 169 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 PYROXD2Q8N2H3 581 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 MICAL1Q8TDZ2 1067 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 KHSRPQ92945 711 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL13A1-201ENST00000354547 NSL1Q96IY1 281 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 WDR90Q96KV7 1748 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 NMUR2Q9GZQ4 415 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 NRDE2Q9H7Z3 1164 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 ITGA11Q9UKX5 1188 aa20.28■□□□□ 0.84
COL13A1-201ENST00000354547 DNAJC25-GNG10A0A024R161 153 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 A6NJR5 290 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 INCA1Q0VD86 236 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 KCNT2Q6UVM3 1135 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 PAPPA2Q9BXP8 1791 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 I3L4J1 428 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 FCHO1O14526 889 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 CCDC22O60826 627 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 CES4AQ5XG92 561 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 DENND5BQ6ZUT9 1274 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 DTX3LQ8TDB6 740 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 SAR1AQ9NR31 198 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 SUFUQ9UMX1 484 aa20.27■□□□□ 0.84
COL13A1-201ENST00000354547 E2F8A0AVK6 867 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 APOEP02649 317 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 AMPD1P23109 780 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 MRPS5P82675 430 aaKnown RBP20.27■□□□□ 0.83
COL13A1-201ENST00000354547 ZNF484Q5JVG2 852 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 ERO1BQ86YB8 467 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 NUDCD3Q8IVD9 361 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 BTBD10Q9BSF8 475 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 IL1RAPL1Q9NZN1 696 aa20.27■□□□□ 0.83
COL13A1-201ENST00000354547 PPARGC1AQ9UBK2 798 aaKnown RBP20.27■□□□□ 0.83
COL13A1-201ENST00000354547 LTBP3Q9NS15 1303 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 PTPRFP10586 1907 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 A8MXQ7 604 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 WFS1O76024 890 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 C1QAP02745 245 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 ENO1P06733 434 aaKnown RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 PAX7P23759 505 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 KPNB1Q14974 876 aaKnown RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 OXNAD1Q96HP4 312 aaPredicted RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 MTO1Q9Y2Z2 717 aaKnown RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 TGM2P21980 687 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 YY1P25490 414 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 PTDSS1P48651 473 aaKnown RBP20.26■□□□□ 0.83
COL13A1-201ENST00000354547 CCDC6Q16204 474 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 ZNF398Q8TD17 642 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 DEPDC1BQ8WUY9 529 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 E2F7Q96AV8 911 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 VRTNQ9H8Y1 702 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 TMPRSS4Q9NRS4 437 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 SEPT10Q9P0V9 454 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms