RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 KCNK16Q96T55 309 aa18.85■□□□□ 0.61
APP-203ENST00000354192 UBP1Q9NZI7 540 aa18.85■□□□□ 0.61
APP-203ENST00000354192 FARP1Q9Y4F1 1045 aaPredicted RBP18.85■□□□□ 0.61
APP-203ENST00000354192 SNX10Q9Y5X0 201 aa18.85■□□□□ 0.61
APP-203ENST00000354192 RGPD3A6NKT7 1758 aaPredicted RBP18.85■□□□□ 0.61
APP-203ENST00000354192 RGPD4Q7Z3J3 1758 aa18.85■□□□□ 0.61
APP-203ENST00000354192 CYB561D2O14569 222 aa18.85■□□□□ 0.61
APP-203ENST00000354192 ARL4AP40617 200 aa18.85■□□□□ 0.61
APP-203ENST00000354192 MGAT5Q09328 741 aa18.85■□□□□ 0.61
APP-203ENST00000354192 SLC10A2Q12908 348 aaPredicted RBP18.85■□□□□ 0.61
APP-203ENST00000354192 TNFAIP8L3Q5GJ75 292 aa18.85■□□□□ 0.61
APP-203ENST00000354192 HFE2Q6ZVN8 426 aa18.85■□□□□ 0.61
APP-203ENST00000354192 KDELC2Q7Z4H8 507 aa18.85■□□□□ 0.61
APP-203ENST00000354192 SLC7A14Q8TBB6 771 aa18.85■□□□□ 0.61
APP-203ENST00000354192 ZNF395Q9H8N7 513 aaPredicted RBP18.85■□□□□ 0.61
APP-203ENST00000354192 PCMTD2Q9NV79 361 aa18.85■□□□□ 0.61
APP-203ENST00000354192 PTPRFP10586 1907 aa18.84■□□□□ 0.61
APP-203ENST00000354192 MGAMO43451 1857 aa18.84■□□□□ 0.61
APP-203ENST00000354192 BGNP21810 368 aa18.84■□□□□ 0.61
APP-203ENST00000354192 IL4RP24394 825 aa18.84■□□□□ 0.61
APP-203ENST00000354192 SLC8A3P57103 927 aa18.84■□□□□ 0.61
APP-203ENST00000354192 ICE2Q659A1 982 aa18.84■□□□□ 0.61
APP-203ENST00000354192 DRICH1Q6PGQ1 229 aaPredicted RBP18.84■□□□□ 0.61
APP-203ENST00000354192 RFX8Q6ZV50 586 aa18.84■□□□□ 0.61
APP-203ENST00000354192 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
APP-203ENST00000354192 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
APP-203ENST00000354192 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
APP-203ENST00000354192 GPATCH11Q8N954 259 aa18.84■□□□□ 0.61
APP-203ENST00000354192 SGSM3Q96HU1 749 aa18.84■□□□□ 0.61
APP-203ENST00000354192 SERAC1Q96JX3 654 aa18.84■□□□□ 0.61
APP-203ENST00000354192 KDM4CQ9H3R0 1056 aa18.84■□□□□ 0.61
APP-203ENST00000354192 NRDE2Q9H7Z3 1164 aa18.84■□□□□ 0.61
APP-203ENST00000354192 UBQLN1Q9UMX0 589 aaKnown RBP18.84■□□□□ 0.61
APP-203ENST00000354192 TRIP12Q14669 1992 aaPredicted RBP18.84■□□□□ 0.61
APP-203ENST00000354192 TAF6P49848 677 aa18.84■□□□□ 0.61
APP-203ENST00000354192 STKLD1Q8NE28 680 aa18.84■□□□□ 0.61
APP-203ENST00000354192 SLC35F5Q8WV83 523 aa18.84■□□□□ 0.61
APP-203ENST00000354192 SIK2Q9H0K1 926 aa18.84■□□□□ 0.61
APP-203ENST00000354192 STIP1P31948 543 aaKnown RBP18.83■□□□□ 0.61
APP-203ENST00000354192 FAM187BQ17R55 369 aa18.83■□□□□ 0.61
APP-203ENST00000354192 DCAF4L1Q3SXM0 396 aa18.83■□□□□ 0.61
APP-203ENST00000354192 SYPL2Q5VXT5 272 aa18.83■□□□□ 0.61
APP-203ENST00000354192 DSTYKQ6XUX3 929 aa18.83■□□□□ 0.61
APP-203ENST00000354192 ZCCHC23Q6ZST2 131 aa18.83■□□□□ 0.61
APP-203ENST00000354192 ARMC2Q8NEN0 867 aa18.83■□□□□ 0.61
APP-203ENST00000354192 ZNF75CPQ92670 426 aaPredicted RBP18.83■□□□□ 0.61
APP-203ENST00000354192 LRRC37BQ96QE4 947 aa18.83■□□□□ 0.61
APP-203ENST00000354192 MYLK2Q9H1R3 596 aa18.83■□□□□ 0.61
APP-203ENST00000354192 ADAMTS10Q9H324 1103 aa18.83■□□□□ 0.61
APP-203ENST00000354192 LGALS13Q9UHV8 139 aa18.83■□□□□ 0.61
APP-203ENST00000354192 IPPQ9Y573 584 aa18.83■□□□□ 0.61
APP-203ENST00000354192 H0Y3Z8 333 aa18.83■□□□□ 0.6
APP-203ENST00000354192 ASMTLO95671 621 aa18.83■□□□□ 0.6
APP-203ENST00000354192 POMCP01189 267 aa18.83■□□□□ 0.6
APP-203ENST00000354192 ITIH4Q14624 930 aa18.83■□□□□ 0.6
APP-203ENST00000354192 CYP4V2Q6ZWL3 525 aaPredicted RBP18.83■□□□□ 0.6
APP-203ENST00000354192 PPP1R14CQ8TAE6 165 aa18.83■□□□□ 0.6
APP-203ENST00000354192 KCNV2Q8TDN2 545 aa18.83■□□□□ 0.6
APP-203ENST00000354192 CFAP69A5D8W1 941 aa18.83■□□□□ 0.6
APP-203ENST00000354192 GPR32O75388 356 aa18.83■□□□□ 0.6
APP-203ENST00000354192 MYCP01106 439 aaPredicted RBP18.83■□□□□ 0.6
APP-203ENST00000354192 PCK1P35558 622 aa18.83■□□□□ 0.6
APP-203ENST00000354192 PSEN2P49810 448 aa18.83■□□□□ 0.6
APP-203ENST00000354192 INCA1Q0VD86 236 aa18.83■□□□□ 0.6
APP-203ENST00000354192 BST2Q10589 180 aaKnown RBP18.83■□□□□ 0.6
APP-203ENST00000354192 KLHL38Q2WGJ6 581 aa18.83■□□□□ 0.6
APP-203ENST00000354192 USP6NLQ92738 828 aa18.83■□□□□ 0.6
APP-203ENST00000354192 PTPRN2Q92932 1015 aa18.83■□□□□ 0.6
APP-203ENST00000354192 PAAF1Q9BRP4 392 aa18.83■□□□□ 0.6
APP-203ENST00000354192 COPEO14579 308 aa18.82■□□□□ 0.6
APP-203ENST00000354192 ZNF410Q86VK4 478 aa18.82■□□□□ 0.6
APP-203ENST00000354192 OSTM1Q86WC4 334 aa18.82■□□□□ 0.6
APP-203ENST00000354192 USP33Q8TEY7 942 aa18.82■□□□□ 0.6
APP-203ENST00000354192 KCTD15Q96SI1 283 aaPredicted RBP18.82■□□□□ 0.6
APP-203ENST00000354192 KATNBL1Q9H079 304 aa18.82■□□□□ 0.6
APP-203ENST00000354192 KRT82Q9NSB4 513 aa18.82■□□□□ 0.6
APP-203ENST00000354192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.82■□□□□ 0.64e-7■□□□□ 9.7
APP-203ENST00000354192 PAK5Q9P286 719 aa18.82■□□□□ 0.6
APP-203ENST00000354192 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
APP-203ENST00000354192 SRRM3A6NNA2 597 aaPredicted RBP18.82■□□□□ 0.6
APP-203ENST00000354192 TNPO2O14787 897 aaKnown RBP18.82■□□□□ 0.6
APP-203ENST00000354192 CPA2P48052 419 aa18.82■□□□□ 0.6
APP-203ENST00000354192 MTFR1Q15390 333 aa18.82■□□□□ 0.6
APP-203ENST00000354192 IQSEC1Q6DN90 963 aa18.82■□□□□ 0.6
APP-203ENST00000354192 OTOAQ7RTW8 1153 aa18.82■□□□□ 0.6
APP-203ENST00000354192 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.6
APP-203ENST00000354192 NFKBIZQ9BYH8 718 aa18.82■□□□□ 0.6
APP-203ENST00000354192 ACSS3Q9H6R3 686 aa18.82■□□□□ 0.6
APP-203ENST00000354192 MYADML2A6NDP7 307 aa18.81■□□□□ 0.6
APP-203ENST00000354192 RRN3P2A6NIE6 340 aa18.81■□□□□ 0.6
APP-203ENST00000354192 GOLGA8TH3BQL2 631 aa18.81■□□□□ 0.6
APP-203ENST00000354192 KRT16P08779 473 aa18.81■□□□□ 0.6
APP-203ENST00000354192 USP17L7P0C7H9 530 aa18.81■□□□□ 0.6
APP-203ENST00000354192 SRGAP2BP0DMP2 458 aa18.81■□□□□ 0.6
APP-203ENST00000354192 NCAM1P13591 858 aa18.81■□□□□ 0.6
APP-203ENST00000354192 BCAT1P54687 386 aa18.81■□□□□ 0.6
APP-203ENST00000354192 LILRA4P59901 499 aa18.81■□□□□ 0.6
APP-203ENST00000354192 NCALDP61601 193 aa18.81■□□□□ 0.6
APP-203ENST00000354192 YWHAZP63104 245 aaKnown RBP18.81■□□□□ 0.6
APP-203ENST00000354192 ELF3P78545 371 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms