RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 GLIS2Q9BZE0 524 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 THAP2Q9H0W7 228 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 PAK5Q9P286 719 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FDX1P10109 184 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 RBP3P10745 1247 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 SLC39A12Q504Y0 691 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 TTC33Q6PID6 262 aaPredicted RBP10.27□□□□□ -0.76
COL11A1-201ENST00000353414 LPAR1Q92633 364 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 PRMT6Q96LA8 375 aaPredicted RBP10.27□□□□□ -0.76
COL11A1-201ENST00000353414 CGRRF1Q99675 332 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 AASDHPPTQ9NRN7 309 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 KLHL3Q9UH77 587 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 CRYL1Q9Y2S2 319 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 GRID2IPA4D2P6 1211 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 TRIM49D1C9J1S8 452 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 SLC37A4O43826 429 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 SLC25A27O95847 323 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 CLTBP09497 229 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 ATP6V1C2Q8NEY4 427 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 TMEM121Q9BTD3 319 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 TMEM8AQ9HCN3 771 aa10.27□□□□□ -0.76
COL11A1-201ENST00000353414 PRMT7Q9NVM4 692 aaPredicted RBP10.27□□□□□ -0.76
COL11A1-201ENST00000353414 BAZ2BQ9UIF8 2168 aaKnown RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 JCHAINP01591 159 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 CXCL8P10145 99 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PSMC6P62333 389 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 GRIK3Q13003 919 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 NEK10Q6ZWH5 1172 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 ZSCAN18Q8TBC5 510 aaPredicted RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SNX6Q9UNH7 406 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PLK1P53350 603 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 ADIGQ0VDE8 80 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PARP8Q8N3A8 854 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 TNIP2Q8NFZ5 429 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SPPL2AQ8TCT8 520 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 CORO1BQ9BR76 489 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PCDHB9Q9Y5E1 797 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 TKTL1P51854 596 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 IQCF2Q8IXL9 164 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 COLGALT2Q8IYK4 626 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 E2F7Q96AV8 911 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PHACTR1Q9C0D0 580 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 RANBP17Q9H2T7 1088 aaKnown RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 JMJD4Q9H9V9 463 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 PDGFCQ9NRA1 345 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 AP4E1Q9UPM8 1137 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 RPAP1Q9BWH6 1393 aaPredicted RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SYNMO15061 1565 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 A0A1B0GW55 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 TMEM120BA0PK00 339 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L2P0CJ85 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L3P0CJ86 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L4P0CJ87 422 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L5P0CJ88 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L6P0CJ89 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4L7P0CJ90 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 ARP10275 920 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SERPINB1P30740 379 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 RFC5P40937 340 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 GCLCP48506 637 aaPredicted RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 UGP2Q16851 508 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 SETMARQ53H47 684 aaPredicted RBP10.27□□□□□ -0.77
COL11A1-201ENST00000353414 FAAH2Q6GMR7 532 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 NAPEPLDQ6IQ20 393 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 CASP10Q92851 521 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 CAMKK2Q96RR4 588 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 KIFC1Q9BW19 673 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 DUX4Q9UBX2 424 aa10.27□□□□□ -0.77
COL11A1-201ENST00000353414 IGSF9BQ9UPX0 1349 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 USP17L7P0C7H9 530 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 FMO4P31512 558 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 INSCQ1MX18 579 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SRLQ86TD4 932 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 FAM228AQ86W67 206 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 LGI2Q8N0V4 545 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ZNF473Q8WTR7 871 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 KLHL31Q9H511 634 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 MADDQ8WXG6 1647 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 TRBV23OR9-2A0A075B6M9 112 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 AP3D1O14617 1153 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SNRPAP09012 282 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CUL2Q13617 745 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 TKFCQ3LXA3 575 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CCDC185Q8N715 623 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 NEDD1Q8NHV4 660 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 PPP1R10Q96QC0 940 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 KLC4Q9NSK0 619 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SNX13Q9Y5W8 968 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 C16orf96A6NNT2 1141 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 STX4Q12846 297 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 STK4Q13043 487 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 RAPSNQ13702 412 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 NR6A1Q15406 480 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SLC13A5Q86YT5 568 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms