RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SNNO75324 88 aaPredicted RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 BMP10O95393 424 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 APOEP02649 317 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 P4HA1P13674 534 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 CYP11B1P15538 503 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ZNF26P17031 533 aaPredicted RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 MRPS5P82675 430 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 CDK18Q07002 472 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
IFT88-202ENST00000351808 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 MYO1HQ8N1T3 1032 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ANKK1Q8NFD2 765 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ZNF778Q96MU6 729 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 C10orf88Q9H8K7 445 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 DAPK2Q9UIK4 370 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 DNAJC16Q9Y2G8 782 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 LAMB1P07942 1786 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 C1orf232A0A0U1RR37 186 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 CHEK2O96017 543 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 SPATA31C1P0DKV0 1188 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 XRCC1P18887 633 aaPredicted RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 SCNN1DP51172 638 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 EIF3EP60228 445 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 SLC15A2Q16348 729 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ANKRD26P1Q6NSI1 321 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 RNF148Q8N7C7 305 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 Q8N9G6 341 aaPredicted RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 ELMO3Q96BJ8 720 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 SH3GL1Q99961 368 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 NAA50Q9GZZ1 169 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 SEMA6AQ9H2E6 1030 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 CXorf21Q9HAI6 301 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 AGPAT3Q9NRZ7 376 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 EXOC7Q9UPT5 735 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 TOM1L1O75674 476 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 EEPD1Q7L9B9 569 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 TMEM126BQ8IUX1 230 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 IGDCC3Q8IVU1 814 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 FIBCD1Q8N539 461 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SPATA17Q96L03 361 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 CLK4Q9HAZ1 481 aaKnown RBP13.68□□□□□ -0.22
IFT88-202ENST00000351808 AFG3L2Q9Y4W6 797 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SPATA31A5Q5VU36 1347 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SPATA31A7Q8IWB4 1347 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 ENTPD3O75355 529 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 C8BP07358 591 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 MYCLP1P12525 358 aaPredicted RBP13.68□□□□□ -0.22
IFT88-202ENST00000351808 CD1EP15812 388 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 PRDX5P30044 214 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 L1CAMP32004 1257 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 ADAM17P78536 824 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 MGAT5BQ3V5L5 792 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 VWA5B1Q5TIE3 1220 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 PDPK2PQ6A1A2 396 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 CARM1Q86X55 608 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 PPP1R14CQ8TAE6 165 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 PNPLA3Q9NST1 481 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 PCDHGA3Q9Y5H0 932 aa13.68□□□□□ -0.22
IFT88-202ENST00000351808 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 DCXO43602 365 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 GUCY1B2O75343 617 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 FAM13AO94988 1023 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 COX4I1P13073 169 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 ZNF182P17025 639 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 THOP1P52888 689 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 MAPK10P53779 464 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 MS4A2Q01362 244 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 USP43Q70EL4 1123 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 BHLHE22Q8NFJ8 381 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 PIWIL2Q8TC59 973 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 TRUB1Q8WWH5 349 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 CPT1BQ92523 772 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 OLFM1Q99784 485 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 PALMDQ9NP74 551 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 DMAC2Q9NW81 257 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms