RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ELK3P41970 407 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 TAP1Q03518 808 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 XRCC4Q13426 336 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 ZNF792Q3KQV3 632 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 DCAF4L1Q3SXM0 396 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 IL31Q6EBC2 164 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 MIB1Q86YT6 1006 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 TCP10LQ8TDR4 215 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PGBD4Q96DM1 585 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PRR11Q96HE9 360 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SENP8Q96LD8 212 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 RILPQ96NA2 401 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PAFAH2Q99487 392 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 RHOBTB2Q9BYZ6 727 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 UGT1A7Q9HAW7 530 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 UGT1A10Q9HAW8 530 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 UGT1A8Q9HAW9 530 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SLC17A6Q9P2U8 582 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SLC12A4Q9UP95 1085 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 AP4E1Q9UPM8 1137 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 ARL2BPQ9Y2Y0 163 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 CILPO75339 1184 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 OR4Q2P0C623 313 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 FAM200BP0CF97 657 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 AKR1A1P14550 325 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 MAP2K2P36507 400 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 COPS2P61201 443 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SLC25A11Q02978 314 aaKnown RBP10.79□□□□□ -0.68
SMPD4-201ENST00000351288 ITIH4Q14624 930 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SETDB1Q15047 1291 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 CA9Q16790 459 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 LRRC6Q86X45 466 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 XYLT1Q86Y38 959 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 VPS52Q8N1B4 723 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 DCLK2Q8N568 766 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 GTF3C2Q8WUA4 911 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PTPRN2Q92932 1015 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 FGD4Q96M96 766 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PLCD4Q9BRC7 762 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 MECRQ9BV79 373 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 RSAD1Q9HA92 442 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 IPPQ9Y573 584 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 NUMBLQ9Y6R0 609 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 PSME4Q14997 1843 aa10.79□□□□□ -0.68
SMPD4-201ENST00000351288 SIGLEC16A6NMB1 481 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 NT5C1B-RDH14C9J2C7 533 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 EPHB2P29323 1055 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 AFF1P51825 1210 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 MROH9Q5TGP6 573 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 PRPF39Q86UA1 669 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SNRNP25Q9BV90 132 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 KATNAL1Q9BW62 490 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 STAP1Q9ULZ2 295 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 DOCK3Q8IZD9 2030 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SSC5DA1L4H1 1573 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ATXN2Q99700 1313 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 MYADML2A6NDP7 307 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 GOLGA8TH3BQL2 631 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ABLIM1O14639 778 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ADCY6O43306 1168 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 BNIP3LO60238 219 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CPB1P15086 417 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CYP3A5P20815 502 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CPA2P48052 419 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SESN3P58005 492 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CAV1Q03135 178 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 KBTBD12Q3ZCT8 623 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SV2CQ496J9 727 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 EFHC2Q5JST6 749 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 LDLRAD1Q5T700 205 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SHCBP1Q8NEM2 672 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 N4BP2L2Q92802 583 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 VCPIP1Q96JH7 1222 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 UNKQ9C0B0 810 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 FLRT1Q9NZU1 646 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ZC3H7BQ9UGR2 993 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 FIS1Q9Y3D6 152 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 IGKV6D-21A0A0A0MT36 114 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 A0A1B0GUA9 196 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 TCRBV5S1A1TA0A578 114 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SLC15A5A6NIM6 579 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 C3orf70A6NLC5 250 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 KBTBD13C9JR72 458 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 LGR5O75473 907 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SKAP2O75563 359 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CYP2F1P24903 491 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 GRIA1P42261 906 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SYDE1Q6ZW31 735 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 UNC5BQ8IZJ1 945 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms