RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CDC42EP4Q9H3Q1 356 aaKnown RBP13.98□□□□□ -0.17
UBA3-201ENST00000349511 CCDC134Q9H6E4 229 aa13.98□□□□□ -0.17
UBA3-201ENST00000349511 YY1AP1Q9H869 796 aa13.98□□□□□ -0.17
UBA3-201ENST00000349511 ADAM28Q9UKQ2 775 aa13.98□□□□□ -0.17
UBA3-201ENST00000349511 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.98□□□□□ -0.17
UBA3-201ENST00000349511 FNDC1Q4ZHG4 1894 aaPredicted RBP13.98□□□□□ -0.17
UBA3-201ENST00000349511 C2CD4BA6NLJ0 364 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 CHUKO15111 745 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 GPD1P21695 349 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 DEFB103AP81534 67 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 KRT17Q04695 432 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 SNX1Q13596 522 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 ITIH4Q14624 930 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 TRMT10CQ7L0Y3 403 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 EXOC3L1Q86VI1 746 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 ANKS4BQ8N8V4 417 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 STKLD1Q8NE28 680 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 SLCO2A1Q92959 643 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 FAM149B1Q96BN6 582 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 DDX23Q9BUQ8 820 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 ROPN1BQ9BZX4 212 aaPredicted RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 ROPN1Q9HAT0 212 aaPredicted RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 LRRC4Q9HBW1 653 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 WHRNQ9P202 907 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 DSEQ9UL01 958 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 VWA8A3KMH1 1905 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 TP73O15350 636 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 PSTPIP1O43586 416 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 TIMP1P01033 207 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 GALTP07902 379 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 RALAP11233 206 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 KRT10P13645 584 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 MAN1A1P33908 653 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 ATXN1P54253 815 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 ARPP19P56211 112 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 IFRD2Q12894 506 aaPredicted RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 XRCC4Q13426 336 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 CCDC14Q49A88 953 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 MFSD5Q6N075 450 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 SCYL2Q6P3W7 929 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 TAOK1Q7L7X3 1001 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 TAS1R1Q7RTX1 841 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 CCDC91Q7Z6B0 441 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 STK32AQ8WU08 396 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 PGLYRP2Q96PD5 576 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 NGRNQ9NPE2 291 aaKnown RBP13.97□□□□□ -0.17
UBA3-201ENST00000349511 MARCH5Q9NX47 278 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
UBA3-201ENST00000349511 RNF8O76064 485 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 PARNO95453 639 aaKnown RBP13.96□□□□□ -0.17
UBA3-201ENST00000349511 KRT1P04264 644 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 MIPP30301 263 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 CHKAP35790 457 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 IFNAR2P48551 515 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 TKTL1P51854 596 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 ZNF143P52747 638 aaPredicted RBP13.96□□□□□ -0.17
UBA3-201ENST00000349511 SLC39A12Q504Y0 691 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
UBA3-201ENST00000349511 FAM171BQ6P995 826 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 RHBDF2Q6PJF5 856 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 TAX1BP1Q86VP1 789 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 NIPA2Q8N8Q9 360 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 BCL7CQ8WUZ0 217 aaPredicted RBP13.96□□□□□ -0.17
UBA3-201ENST00000349511 HSPH1Q92598 858 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 SGSM3Q96HU1 749 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 HSFY1Q96LI6 401 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 ADAM33Q9BZ11 813 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 CHST7Q9NS84 486 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 SAMD15Q9P1V8 674 aa13.96□□□□□ -0.17
UBA3-201ENST00000349511 SYNJ2BP-COX16A0A087WUM0 186 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 ACSL3O95573 720 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 USP17L7P0C7H9 530 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 CYP2F1P24903 491 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 TSPY1Q01534 308 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.18
UBA3-201ENST00000349511 SNCBQ16143 134 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 SPOUT1Q5T280 376 aaKnown RBP13.96□□□□□ -0.18
UBA3-201ENST00000349511 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 HFE2Q6ZVN8 426 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 FNIP1Q8TF40 1166 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 PEBP4Q96S96 227 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 PLVAPQ9BX97 442 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 ULBP1Q9BZM6 244 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 ASNSD1Q9NWL6 643 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.18
UBA3-201ENST00000349511 COX16Q9P0S2 106 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 ASIC3Q9UHC3 531 aa13.96□□□□□ -0.18
UBA3-201ENST00000349511 LRRD1A4D1F6 860 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 TMEM189-UBE2V1I3L0A0 370 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms