RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 BBS7Q8IWZ6 715 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 CHRDQ9H2X0 955 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 ABCC13Q9NSE7 274 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 OLA1Q9NTK5 396 aaKnown RBP23.15■■□□□ 1.3
SNX3-202ENST00000349379 CAVIN2O95810 425 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 IRF1P10914 325 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 CYP11B1P15538 503 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 POLR2FP61218 127 aaKnown RBP23.14■■□□□ 1.29
SNX3-202ENST00000349379 COG7P83436 770 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 EFEMP1Q12805 493 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 NR1H3Q13133 447 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 DHCR24Q15392 516 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 MSANTD2Q6P1R3 559 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 RHBDF2Q6PJF5 856 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 DDX1Q92499 740 aaKnown RBP23.14■■□□□ 1.29
SNX3-202ENST00000349379 IER2Q9BTL4 223 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 LMAN1LQ9HAT1 526 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 RTN4Q9NQC3 1192 aaKnown RBP23.14■■□□□ 1.29
SNX3-202ENST00000349379 ST7Q9NRC1 585 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 MARCH2Q9P0N8 246 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 RASAL2Q9UJF2 1139 aa23.14■■□□□ 1.29
SNX3-202ENST00000349379 E5RJQ4 531 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 PAPSS1O43252 624 aaPredicted RBP23.13■■□□□ 1.29
SNX3-202ENST00000349379 LTFP02788 710 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 CDH5P33151 784 aaPredicted RBP23.13■■□□□ 1.29
SNX3-202ENST00000349379 PTPN5P54829 565 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 DGKKQ5KSL6 1271 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 NAIF1Q69YI7 327 aaPredicted RBP23.13■■□□□ 1.29
SNX3-202ENST00000349379 FSTL4Q6MZW2 842 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 RSRC2Q7L4I2 434 aaKnown RBP23.13■■□□□ 1.29
SNX3-202ENST00000349379 MIB1Q86YT6 1006 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 SCUBE3Q8IX30 993 aa23.13■■□□□ 1.29
SNX3-202ENST00000349379 LSM7Q9UK45 103 aaKnown RBP23.13■■□□□ 1.29
SNX3-202ENST00000349379 TEX33O43247 280 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 SART1O43290 800 aaKnown RBP23.12■■□□□ 1.29
SNX3-202ENST00000349379 KLKB1P03952 638 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 FYNP06241 537 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 KRT9P35527 623 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 OPRD1P41143 372 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 LRRC32Q14392 662 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 MAMSTRQ6ZN01 415 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 BEND5Q7L4P6 421 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 PASD1Q8IV76 773 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 C1orf131Q8NDD1 294 aaKnown RBP23.12■■□□□ 1.29
SNX3-202ENST00000349379 NEK11Q8NG66 645 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 EPS8L1Q8TE68 723 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 EDEM1Q92611 657 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 CPXM1Q96SM3 734 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 P2RY13Q9BPV8 354 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 MIS12Q9H081 205 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 FBRSL1Q9HCM7 1045 aaKnown RBP23.12■■□□□ 1.29
SNX3-202ENST00000349379 NLRC4Q9NPP4 1024 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 TJP2Q9UDY2 1190 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 STRIP2Q9ULQ0 834 aa23.12■■□□□ 1.29
SNX3-202ENST00000349379 A0A1B0GTH6 734 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 ADH1CP00326 375 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 SOX5P35711 763 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 GALK1P51570 392 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 GAS6Q14393 721 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 LY6G5CQ5SRR4 150 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 NOP9Q86U38 636 aaKnown RBP23.11■■□□□ 1.29
SNX3-202ENST00000349379 LUZP1Q86V48 1076 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 C1orf210Q8IVY1 113 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 SYNPOQ8N3V7 929 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 RNF139Q8WU17 664 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 CD101Q93033 1021 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 SPHK2Q9NRA0 654 aa23.11■■□□□ 1.29
SNX3-202ENST00000349379 RBM12Q9NTZ6 932 aaKnown RBP23.11■■□□□ 1.29
SNX3-202ENST00000349379 HBS1LQ9Y450 684 aaKnown RBP23.11■■□□□ 1.29
SNX3-202ENST00000349379 MYO18AQ92614 2054 aaKnown RBP23.11■■□□□ 1.29
SNX3-202ENST00000349379 SLC12A8A0AV02 714 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 HOXC11O43248 304 aaPredicted RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 ADH5P11766 374 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 EIF2DP41214 584 aaKnown RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 ANGPT1Q15389 498 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 TRIP4Q15650 581 aaPredicted RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 NFKBIBQ15653 356 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 FMNL3Q8IVF7 1028 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 MAML2Q8IZL2 1156 aaPredicted RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 EZH1Q92800 747 aaPredicted RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 PLD4Q96BZ4 506 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 PPP1R13BQ96KQ4 1090 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 PCMTD1Q96MG8 357 aaPredicted RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 MARK1Q9P0L2 795 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 NOCTQ9UK39 431 aaKnown RBP23.1■■□□□ 1.29
SNX3-202ENST00000349379 ZNF510Q9Y2H8 683 aa23.1■■□□□ 1.29
SNX3-202ENST00000349379 GFPT2O94808 682 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 DRD1P21728 446 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 GAD2Q05329 585 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 GRSF1Q12849 480 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNX3-202ENST00000349379 MTAPQ13126 283 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 PTPN20Q4JDL3 420 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 ZNF677Q86XU0 584 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 ETFBKMTQ8IXQ9 262 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 EXOC4Q96A65 974 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 PIWIL1Q96J94 861 aaKnown RBP23.09■■□□□ 1.29
SNX3-202ENST00000349379 NAP1L5Q96NT1 182 aaPredicted RBP23.09■■□□□ 1.29
SNX3-202ENST00000349379 NOX5Q96PH1 765 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 SPAG5Q96R06 1193 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 DCLK3Q9C098 648 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms