RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 EHD2Q9NZN4 543 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 TRPM5Q9NZQ8 1165 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 DPP7Q9UHL4 492 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 CDH22Q9UJ99 828 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 SPDYE4A6NLX3 237 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 CAPN9O14815 690 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 KIF5CO60282 957 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 POU2F2P09086 479 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 PTPN2P17706 415 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 SDC4P31431 198 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 PTPN9P43378 593 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 SULT1E1P49888 294 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 EPHA5P54756 1037 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 TAS2R40P59535 323 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 CYP4F8P98187 520 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 DLX2Q07687 328 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 IFI16Q16666 785 aaKnown RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 SLC25A52Q3SY17 297 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 RARS2Q5T160 578 aaKnown RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 ANKRD54Q6NXT1 300 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 GRASPQ7Z6J2 395 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 TAC4Q86UU9 113 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 NIPA2Q8N8Q9 360 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 PDZD8Q8NEN9 1154 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 CENPIQ92674 756 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 GOLGA1Q92805 767 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 SFXN1Q9H9B4 322 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 DZANK1Q9NVP4 752 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 CLIC5Q9NZA1 410 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 CLEC1BQ9P126 229 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 UXTQ9UBK9 157 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 SFMBT1Q9UHJ3 866 aa19.84■□□□□ 0.77
CHMP4A-201ENST00000347519 C2orf78A6NCI8 922 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 NCK2O43639 380 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 XYLBO75191 536 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 RHOP08100 348 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 PSEN1P49768 467 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 HDAC4P56524 1084 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 PIGHQ14442 188 aaPredicted RBP19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 SLC5A9Q2M3M2 681 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 CTC1Q2NKJ3 1217 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 CC2D1AQ6P1N0 951 aaPredicted RBP19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 MSANTD2Q6P1R3 559 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 NT5DC3Q86UY8 548 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 MICALL1Q8N3F8 863 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 CMASQ8NFW8 434 aaPredicted RBP19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 SHKBP1Q8TBC3 707 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 FAM172AQ8WUF8 416 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 MYLIPQ8WY64 445 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 SMG7Q92540 1137 aaKnown RBP19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 ASAH2Q9NR71 780 aa19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 PACSIN2Q9UNF0 486 aaPredicted RBP19.83■□□□□ 0.77
CHMP4A-201ENST00000347519 SYNJ2BP-COX16A0A087WUM0 186 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 A0A1W2PRU2 124 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 M0QYT0 321 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 ZNF500O60304 480 aaPredicted RBP19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 TLR5O60602 858 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 TBX10O75333 385 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 LRCH4O75427 683 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 ENDOD1O94919 500 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 IGLV3-25P01717 112 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 MAN1A1P33908 653 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 PRSS36Q5K4E3 855 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 STXBP5Q5T5C0 1151 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 TXNRD3NBQ6F5E7 133 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 POTEHQ6S545 545 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 TRIM58Q8NG06 486 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 CALR3Q96L12 384 aaKnown RBP19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC22A12Q96S37 553 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 PEBP4Q96S96 227 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 COX16Q9P0S2 106 aa19.83■□□□□ 0.76
CHMP4A-201ENST00000347519 MSI1O43347 362 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 TRUB2O95900 331 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 OAS1P00973 400 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 RALAP11233 206 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 IL1R2P27930 398 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 LTBRP36941 435 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 MARCKSL1P49006 195 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 ETF1P62495 437 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 EFEMP1Q12805 493 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 EIF4EBP2Q13542 120 aaPredicted RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 HECTD3Q5T447 861 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 TXNDC8Q6A555 127 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 ELMSAN1Q6PJG2 1045 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 RNF139Q8WU17 664 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 CD101Q93033 1021 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 GUCD1Q96NT3 240 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 ALS2CR12Q96Q35 445 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 GAS2L1Q99501 681 aaPredicted RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 CDX2Q99626 313 aaPredicted RBP19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 RNF38Q9H0F5 515 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 SMOC2Q9H3U7 446 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 PIGVQ9NUD9 493 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 STAP1Q9ULZ2 295 aa19.82■□□□□ 0.76
CHMP4A-201ENST00000347519 ENC1O14682 589 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 COCHO43405 550 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 TNNT1P13805 278 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 MIPP30301 263 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 PPP3CCP48454 512 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 NME3Q13232 169 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms