RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 NKD2Q969F2 451 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 ZNF558Q96NG5 402 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 PGLYRP2Q96PD5 576 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 RNF157Q96PX1 679 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 SLC9A7Q96T83 725 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 FAM118BQ9BPY3 351 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 FZD10Q9ULW2 581 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 ECHS1P30084 290 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 NME3Q13232 169 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 PTK6Q13882 451 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 BTG3Q14201 252 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 CA9Q16790 459 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 FAM117BQ6P1L5 589 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 NUP93Q8N1F7 819 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 CCDC185Q8N715 623 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 DHX35Q9H5Z1 703 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 DNPEPQ9ULA0 475 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 SNX24Q9Y343 169 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 MYO16Q9Y6X6 1858 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 MTMR11A4FU01 709 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 APOC4-APOC2K7ER74 178 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 SASH3O75995 380 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 F9P00740 461 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 APOC2P02655 101 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 LAG3P18627 525 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 L1CAMP32004 1257 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 AIF1P55008 147 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 VCPP55072 806 aaKnown RBP22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 ANKRD20A8PQ5CZ79 823 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 RSPO2Q6UXX9 243 aaPredicted RBP22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 ATAD1Q8NBU5 361 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 HAUS1Q96CS2 278 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 FAF2Q96CS3 445 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 MCOLN1Q9GZU1 580 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 FBXO44Q9H4M3 255 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 MTRRQ9UBK8 725 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 PRKAG2Q9UGJ0 569 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 ZNF148Q9UQR1 794 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 BACE2Q9Y5Z0 518 aa22.34■■□□□ 1.17
TSPAN3-202ENST00000346495 SYNJ2BP-COX16A0A087WUM0 186 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 EN2P19622 333 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 IL4RP24394 825 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 YWHAGP61981 247 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 OTUD4Q01804 1114 aaKnown RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 IFRD2Q12894 506 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PPIGQ13427 754 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 DDR2Q16832 855 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PPP6R3Q5H9R7 873 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PRSS55Q6UWB4 352 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 ZNF365Q70YC5 407 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 TMCO2Q7Z6W1 182 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 SLC39A11Q8N1S5 342 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 SLC35B2Q8TB61 432 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 ACTL9Q8TC94 416 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PIK3R5Q8WYR1 880 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 EDEM1Q92611 657 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 GDAP1L1Q96MZ0 367 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 FAM129AQ9BZQ8 928 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 ABCC13Q9NSE7 274 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PIGVQ9NUD9 493 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 COX16Q9P0S2 106 aa22.33■■□□□ 1.17
TSPAN3-202ENST00000346495 PLXNA3P51805 1871 aa22.33■■□□□ 1.16
TSPAN3-202ENST00000346495 APOL1O14791 398 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 ITGAVP06756 1048 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM153BP0C7A2 387 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 RPL21P46778 160 aaKnown RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 OASLQ15646 514 aaKnown RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 PSMD5Q16401 504 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 KCTD19Q17RG1 926 aaPredicted RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM153CQ494X1 144 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 BTBD8Q5XKL5 378 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 KIAA1841Q6NSI8 718 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 RNF19BQ6ZMZ0 732 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 GSTA5Q7RTV2 222 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 FBXO22Q8NEZ5 403 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 RIN2Q8WYP3 895 aaPredicted RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 NTAN1Q96AB6 310 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 TMEM169Q96HH4 297 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 KCTD15Q96SI1 283 aaPredicted RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 VN1R3Q9BXE9 311 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM204AQ9H8W3 233 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 VIPAS39Q9H9C1 493 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 DDIT4Q9NX09 232 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 RCOR3Q9P2K3 495 aaPredicted RBP22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 ASIC3Q9UHC3 531 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM153AQ9UHL3 310 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 SCML2Q9UQR0 700 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 NEU2Q9Y3R4 380 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 PTPRSQ13332 1948 aa22.32■■□□□ 1.16
TSPAN3-202ENST00000346495 SOD2P04179 222 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 TGM2P21980 687 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 SLC8B1Q6J4K2 584 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 OTOP2Q7RTS6 562 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 CCDC89Q8N998 374 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 COLGALT1Q8NBJ5 622 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 CCHCR1Q8TD31 782 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 YME1L1Q96TA2 773 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 NEUROG2Q9H2A3 272 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 MTMR10Q9NXD2 777 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms