RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RPAP3Q9H6T3 665 aaPredicted RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 GPRC5CQ9NQ84 441 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 IQGAP1P46940 1657 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 GPR75-ASB3A0A0A6YYF3 556 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 NRF1Q16656 503 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 AADACL2Q6P093 401 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 CYP2R1Q6VVX0 501 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 BHLHE22Q8NFJ8 381 aaPredicted RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 ZSCAN18Q8TBC5 510 aaPredicted RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 PIWIL2Q8TC59 973 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 BAP1Q92560 729 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SEPHS2Q99611 448 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 DIABLOQ9NR28 239 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 LMCD1Q9NZU5 365 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 MRASO14807 208 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 ADCY6O43306 1168 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 TOMM70O94826 608 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 CYP24A1Q07973 514 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 FAM98BQ52LJ0 330 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 NANOGNBQ7Z5D8 188 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 DGCR14Q96DF8 476 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 GPATCH2LQ9NWQ4 482 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 H2AFY2Q9P0M6 372 aaPredicted RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 SPDYE5A6NIY4 337 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 INPP4BO15327 924 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 PEX1O43933 1283 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 GEMP55040 296 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 FASTKQ14296 549 aaKnown RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 SPDYE7PQ495Y7 208 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 AAGABQ6PD74 315 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 KCNV1Q6PIU1 500 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 HDDC2Q7Z4H3 204 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 FAM172AQ8WUF8 416 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 KAT2BQ92831 832 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 NSMCE2Q96MF7 247 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 COMMD8Q9NX08 183 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 AAR2Q9Y312 384 aaKnown RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 PRPF4O43172 522 aaKnown RBP eCLIP17.95■□□□□ 0.46
SPAST-202ENST00000345662 PGK2P07205 417 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 PRELID2Q8N945 189 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 TRDMT1O14717 391 aaKnown RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 PMPCBO75439 489 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 C4BPBP20851 252 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 GRTP1Q5TC63 336 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 FAM13CQ8NE31 585 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 SEPT1Q8WYJ6 367 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 C6orf62Q9GZU0 229 aaPredicted RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 RSL24D1Q9UHA3 163 aaKnown RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 VAV1P15498 845 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 NPTX2P47972 431 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 XIAPP98170 497 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 GALNTL6Q49A17 601 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 FBXW8Q8N3Y1 598 aa17.95■□□□□ 0.46
SPAST-202ENST00000345662 REXO4Q9GZR2 422 aaKnown RBP17.95■□□□□ 0.46
SPAST-202ENST00000345662 PNMA8CA0A1B0GUJ8 204 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TBKBP1A7MCY6 615 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 PKNOX1P55347 436 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CDC42EP5Q6NZY7 148 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 OTOAQ7RTW8 1153 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TRPC7Q9HCX4 862 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 SLCO1B3Q9NPD5 702 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TMCO1Q9UM00 188 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TSC22D2O75157 780 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 DDHD2O94830 711 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 VDRP11473 427 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CHRM3P20309 590 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 MAPK10P53779 464 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 PSMC6P62333 389 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 DCAF4L1Q3SXM0 396 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 AARS2Q5JTZ9 985 aaKnown RBP17.94■□□□□ 0.46
SPAST-202ENST00000345662 RNF219Q5W0B1 726 aaPredicted RBP17.94■□□□□ 0.46
SPAST-202ENST00000345662 PKN3Q6P5Z2 889 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CAMK1DQ8IU85 385 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 KATNAL2Q8IYT4 538 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 EMC1Q8N766 993 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CGRRF1Q99675 332 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
SPAST-202ENST00000345662 BAIAP3O94812 1187 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 YY1P25490 414 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CACNB2Q08289 660 aaPredicted RBP17.94■□□□□ 0.46
SPAST-202ENST00000345662 MRNIPQ6NTE8 343 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 ZNF554Q86TJ5 538 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 SLC22A9Q8IVM8 553 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 LPAR1Q92633 364 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 LRRC19Q9H756 370 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 RNF112Q9ULX5 631 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 CAMSAP1Q5T5Y3 1602 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 ITGB3P05106 788 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 RNF220Q5VTB9 566 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 PTRHD1Q6GMV3 140 aaKnown RBP17.94■□□□□ 0.46
SPAST-202ENST00000345662 OLFML1Q6UWY5 402 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 ZSWIM2Q8NEG5 633 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 WDR41Q9HAD4 459 aa17.94■□□□□ 0.46
SPAST-202ENST00000345662 KIAA1257Q9ULG3 409 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms