RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PHACTR1Q9C0D0 580 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CLK4Q9HAZ1 481 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 TPRKBQ9Y3C4 175 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ZMYM2Q9UBW7 1377 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 EPHB6O15197 1021 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 IMPDH2P12268 514 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 GIT2Q14161 759 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PCSK7Q16549 785 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ELMSAN1Q6PJG2 1045 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 GRIN2DO15399 1336 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CENPXA8MT69 81 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PDE9AO76083 593 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ARPP19P56211 112 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 GALNTL6Q49A17 601 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 BOLA3Q53S33 107 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 BROXQ5VW32 411 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SPRTNQ9H040 489 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 COMMD8Q9NX08 183 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 DNPEPQ9ULA0 475 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 VWA5AO00534 786 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 TRIM13O60858 407 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 VAC14Q08AM6 782 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 GRAPQ13588 217 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PKN1Q16512 942 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 MIER2Q8N344 545 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 UBA3Q8TBC4 463 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PIWIL2Q8TC59 973 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 NAT9Q9BTE0 207 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF341Q9BYN7 854 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 TOPORSQ9NS56 1045 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 VTI1BQ9UEU0 232 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CDC42BPBQ9Y5S2 1711 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 GNL1P36915 607 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CCDC153Q494R4 210 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PRMT9Q6P2P2 845 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CLNKQ7Z7G1 428 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ATPAF2Q8N5M1 289 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 UCMAQ8WVF2 138 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PIPSLA2A3N6 862 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 HS6ST1O60243 411 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 BBOX1O75936 387 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 COX4I1P13073 169 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CCNFP41002 786 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 LSM3P62310 102 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ANGPT1Q15389 498 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 KLHL12Q53G59 568 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 SATL1Q86VE3 508 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 UNC45BQ8IWX7 931 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 S100ZQ8WXG8 99 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CELF1Q92879 486 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 VPS33AQ96AX1 596 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 OSBPL11Q9BXB4 747 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 NIF3L1Q9GZT8 377 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CAPN8A6NHC0 703 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PCP4L1A6NKN8 68 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 NDUFS3O75489 264 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PSMC6P62333 389 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PWP1Q13610 501 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 AARS2Q5JTZ9 985 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 SUN5Q8TC36 379 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 TRIM45Q9H8W5 580 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 S100A14Q9HCY8 104 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PTTG2Q9NZH5 202 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CSADQ9Y600 493 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 EFCAB14O75071 495 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF682O95780 498 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CCT8P50990 548 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 POU4F1Q01851 419 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 SNX17Q15036 470 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 MIIPQ5JXC2 388 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 LRRC40Q9H9A6 602 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CCDC167Q9P0B6 97 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF335Q9H4Z2 1342 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 VCLP18206 1134 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PBX1P40424 430 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 FCHO2Q0JRZ9 810 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF235Q14590 738 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 STILQ15468 1287 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 DDR2Q16832 855 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CLEC10AQ8IUN9 316 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 C8orf59Q8N0T1 100 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 PRELID2Q8N945 189 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 CNPY3Q9BT09 278 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 HDHD2Q9H0R4 259 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms