RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZFR2Q9UPR6 939 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 EMILIN1Q9Y6C2 1016 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 A8MVJ9 347 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PAMP19021 973 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TNFAIP3P21580 790 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 NPTX2P47972 431 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF34Q8IZ26 560 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TMCO6Q96DC7 493 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SH3BP4Q9P0V3 963 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PLEKHA6Q9Y2H5 1048 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MOCS2O96007 188 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RARGP13631 454 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 OASLQ15646 514 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 METTL21CQ5VZV1 264 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZCCHC8Q6NZY4 707 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PIAS4Q8N2W9 510 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GIPC3Q8TF64 312 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ANKZF1Q9H8Y5 726 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 UFSP2Q9NUQ7 469 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC13A4Q9UKG4 626 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RAB2BQ8WUD1 216 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MTMR10Q9NXD2 777 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PIGBOS1A0A0B4J2F0 54 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 IFNA10P01566 189 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 IFNA4P05014 189 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SDSP20132 328 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 INHBEP58166 350 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 UBE2IP63279 158 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CLEC4FQ8N1N0 589 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 C12orf29Q8N999 325 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TTC13Q8NBP0 860 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GLMNQ92990 594 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TGS1Q96RS0 853 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ELAC2Q9BQ52 826 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SPATA2Q9UM82 520 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 A0A0X1KG70 313 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TRIM49BA6NDI0 452 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 KIF28PB7ZC32 967 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TRIM49D1C9J1S8 452 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RFX4Q33E94 735 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MIGA2Q7L4E1 593 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 KIF18BQ86Y91 864 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC39A13Q96H72 371 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 APOL6Q9BWW8 343 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CYP26B1Q9NR63 512 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM39AQ9NV64 488 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 NOB1Q9ULX3 412 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ATP10BO94823 1461 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PFASO15067 1338 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 APOC1P02654 83 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJA1P31689 397 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 EDRF1Q3B7T1 1238 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDIK1LQ8N165 341 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF283Q8N7M2 679 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CCNYL1Q8N7R7 359 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 FCGR1BQ92637 280 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SERHLQ9NQF3 203 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC9A8Q9Y2E8 581 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PCDHB3Q9Y5E6 796 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 NDUFA10O95299 355 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 AHSA1O95433 338 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 HLA-DRAP01903 254 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RPN2P04844 631 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LYNP07948 512 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 UBE3CQ15386 1083 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TRIP13Q15645 432 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC85BQ15834 202 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 XKR9Q5GH70 373 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 EIF3MQ7L2H7 374 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 OR52K1Q8NGK4 314 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 FNBP1Q96RU3 617 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF334Q9HCZ1 680 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PCP4L1A6NKN8 68 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TM9SF1O15321 606 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB14O43829 449 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SERPINB7O75635 380 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 USP1O94782 785 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC130P13994 396 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 METTL2BQ6P1Q9 378 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RTKN2Q8IZC4 609 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEB18Q96M61 343 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GTPBP2Q9BX10 602 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGEF38Q9NXL2 777 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDE2AO00408 941 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ADAMTS4O75173 837 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 UGT1A3P35503 534 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDIA2Q13087 525 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 DGKDQ16760 1214 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 COLEC12Q5KU26 742 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 S100A13Q99584 98 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 UMODL1Q5DID0 1318 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ASXL1Q8IXJ9 1541 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 HADHAP40939 763 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC7A5Q01650 507 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL24Q6TFL4 600 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TMC7Q7Z402 723 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ARID3BQ8IVW6 561 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MARVELD2Q8N4S9 558 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TGFBRAP1Q8WUH2 860 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms