RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 DFFAO00273 331 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 WNT7AO00755 349 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 KCTD2Q14681 263 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 LRRC38Q5VT99 294 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 STRA8Q7Z7C7 330 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 TTC30AQ86WT1 665 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 CBWD2Q8IUF1 395 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 AGAP3Q96P47 875 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 GPR101Q96P66 508 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 A0A0B4J269 797 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 VCLP18206 1134 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 MRPS22P82650 360 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 CAMK1DQ8IU85 385 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 C12orf50Q8NA57 414 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 FBXO6Q9NRD1 293 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ARHGEF38Q9NXL2 777 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 MORF4L1Q9UBU8 362 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 VANGL2Q9ULK5 521 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 PRPF19Q9UMS4 504 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 FSCN2O14926 492 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 UBDO15205 165 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 DGKIO75912 1065 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 LYNP07948 512 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 CYP2C9P11712 490 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 DNAJB2P25686 324 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 MPP3Q13368 585 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SAMD4BQ5PRF9 694 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 LRRC8DQ7L1W4 858 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 NUP93Q8N1F7 819 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ASB2Q96Q27 587 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 POP1Q99575 1024 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 UBE2OQ9C0C9 1292 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 RIC8BQ9NVN3 520 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 COPG2Q9UBF2 871 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 TIAM2Q8IVF5 1701 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 DDX60Q8IY21 1712 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 KLHL33A6NCF5 533 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ECE2O60344 883 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 NPTX2P47972 431 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 PRKG1Q13976 671 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SLCO2A1Q92959 643 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 MED1Q15648 1581 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SPDYE16A6NNV3 312 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SPDYE2Q495Y8 402 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ADGRD1Q6QNK2 874 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 NOP9Q86U38 636 aaKnown RBP4.93□□□□□ -1.62
CSMD3-203ENST00000343508 P3H2Q8IVL5 708 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 RNF149Q8NC42 400 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 GPRASP2Q96D09 838 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SH2D3AQ9BRG2 576 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 ACSS3Q9H6R3 686 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 SYNPO2Q9UMS6 1093 aa4.93□□□□□ -1.62
CSMD3-203ENST00000343508 RARBP10826 455 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF23P17027 643 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 NSUN2Q08J23 767 aaKnown RBP eCLIP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 INTS5Q6P9B9 1019 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF560Q96MR9 790 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TDRD3Q9H7E2 651 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PTTG2Q9NZH5 202 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RGSL1A5PLK6 1076 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RGL2O15211 777 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ATICP31939 592 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DAB2P98082 770 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MAMLD1Q13495 774 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DPYSL3Q14195 570 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 EMC2Q15006 297 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM63BQ5T3F8 832 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PLA2G4FQ68DD2 849 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GADL1Q6ZQY3 521 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 THEM5Q8N1Q8 247 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 C7orf26Q96N11 449 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RTKNQ9BST9 563 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KLHL25Q9H0H3 589 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TAS2R14Q9NYV8 317 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 USP21Q9UK80 565 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 UBA6A0AVT1 1052 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ENTPD3O75355 529 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 WDR47O94967 919 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CYP3A4P08684 503 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TBCELQ5QJ74 424 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SNRNP48Q6IEG0 339 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ABRAXAS1Q6UWZ7 409 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PQLC1Q8N2U9 271 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 C1orf21Q9H246 121 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 COPS7BQ9H9Q2 264 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ANXA9O76027 345 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PRKCBP05771 671 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 VAV1P15498 845 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TFE3P19532 575 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 IFNA8P32881 189 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RPL26P61254 145 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TKFCQ3LXA3 575 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 BHLHE22Q8NFJ8 381 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PTCD3Q96EY7 689 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TEX12Q9BXU0 123 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 COG4Q9H9E3 785 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 INPP5FQ9Y2H2 1132 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms