RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CHSY1Q86X52 802 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CLEC4FQ8N1N0 589 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 BLOC1S5Q8TDH9 187 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CKAP2Q8WWK9 683 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 FAM163AQ96GL9 167 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 APOL5Q9BWW9 433 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ILKAPQ9H0C8 392 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC134Q9H6E4 229 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PCDH9Q9HC56 1237 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SLC38A7Q9NVC3 462 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ARMCX1Q9P291 453 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TSPAN16Q9UKR8 245 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 NCF1BA6NI72 391 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 NCF1CA8MVU1 366 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 F8W8V4 182 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CYB561D2O14569 222 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 NCF1P14598 390 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TPH1P17752 444 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 USP46P62068 366 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DAB2P98082 770 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SCUBE3Q8IX30 993 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ANKRD13AQ8IZ07 590 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ADGRF2Q8IZF7 708 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 OSMRQ99650 979 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ASPSCR1Q9BZE9 553 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SNTG2Q9NY99 539 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 BANF1O75531 89 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PSMD10O75832 226 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SUPT7LO94864 414 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 JCHAINP01591 159 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MAPTP10636 758 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 OASLQ15646 514 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 FUT11Q495W5 492 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ZRANB3Q5FWF4 1079 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ZCCHC23Q6ZST2 131 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MIB1Q86YT6 1006 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 COLGALT1Q8NBJ5 622 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SPATA20Q8TB22 786 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 FRMD8Q9BZ67 464 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DDX28Q9NUL7 540 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SLC24A2Q9UI40 661 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ATP11BQ9Y2G3 1177 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 WNT10BO00744 389 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 IRF6O14896 467 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 GAS2O43903 313 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 B3GAT3O94766 335 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 RHOBTB1O94844 696 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MICAL2O94851 1124 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CHRM3P20309 590 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 KCNA4P22459 653 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 AKAP5P24588 427 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 NEK2P51955 445 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 GCNT1Q02742 428 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CBX3Q13185 183 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 C4orf22Q6V702 233 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 FAM13CQ8NE31 585 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 GDPD5Q8WTR4 605 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CELF6Q96J87 481 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 KATNAL1Q9BW62 490 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TRIM54Q9BYV2 358 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PKP3Q9Y446 797 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 MYO1GB0I1T2 1018 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 RALBP11234 206 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 INSRRP14616 1297 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ADRA1DP25100 572 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PRKCIP41743 596 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 BNIP1Q12981 228 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 TBCCQ15814 346 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 TRMT5Q32P41 509 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 MAP4K3Q8IVH8 894 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ELMOD1Q8N336 334 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 EDEM1Q92611 657 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PARK7Q99497 189 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 IDI2Q9BXS1 227 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 KLHL25Q9H0H3 589 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SETD4Q9NVD3 440 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 DCDC2Q9UHG0 476 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SLC30A1Q9Y6M5 507 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 FKBP6O75344 327 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PGM3O95394 542 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CYP2C8P10632 490 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 MMP13P45452 471 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF157P51786 506 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 FAAP100Q0VG06 881 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 VEPH1Q14D04 833 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 KBTBD12Q3ZCT8 623 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 DENND1BQ6P3S1 775 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 METTL7BQ6UX53 244 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms