RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 COL6A1P12109 1028 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 CYP2F1P24903 491 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 TSPY1Q01534 308 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 ROR1Q01973 937 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 KRT71Q3SY84 523 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 DARS2Q6PI48 645 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 B4GALNT4Q76KP1 1039 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 CTU1Q7Z7A3 348 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 ZC3H18Q86VM9 953 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 UHMK1Q8TAS1 419 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 FAM193BQ96PV7 902 aaPredicted RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 ELAC1Q9H777 363 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 COX16Q9P0S2 106 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 ZNF638Q14966 1978 aaKnown RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 TMEM189-UBE2V1I3L0A0 370 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 ZBED1O96006 694 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 RDXP35241 583 aaKnown RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 RPL22P35268 128 aaKnown RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 BCAR1P56945 870 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 YWHAHQ04917 246 aaPredicted RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 TCTN1Q2MV58 587 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 RNASEH2BQ5TBB1 312 aaKnown RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 AGBL2Q5U5Z8 902 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 BHLHA9Q7RTU4 235 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 ZCCHC9Q8N567 271 aaKnown RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 FOXP3Q9BZS1 431 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 NRDE2Q9H7Z3 1164 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 OGDHLQ9ULD0 1010 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 PRG3Q9Y2Y8 225 aaPredicted RBP20.8■□□□□ 0.92
RTN1-202ENST00000342503 PCDHB7Q9Y5E2 793 aa20.8■□□□□ 0.92
RTN1-202ENST00000342503 TANC1Q9C0D5 1861 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 H7C0C1 242 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 PITPNM1O00562 1244 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 CAPN9O14815 690 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 PQBP1O60828 265 aaKnown RBP20.79■□□□□ 0.92
RTN1-202ENST00000342503 CCL5P13501 91 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 ATP5OP48047 213 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 LMAN1P49257 510 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 DEUP1Q05D60 604 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 MAPRE1Q15691 268 aaKnown RBP20.79■□□□□ 0.92
RTN1-202ENST00000342503 PYROXD2Q8N2H3 581 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 FAM71DQ8N9W8 422 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 SEPT8Q92599 483 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 RNF208Q9H0X6 261 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 DMAP1Q9NPF5 467 aaPredicted RBP20.79■□□□□ 0.92
RTN1-202ENST00000342503 BCCIPQ9P287 314 aaKnown RBP eCLIP20.79■□□□□ 0.92
RTN1-202ENST00000342503 HEY1Q9Y5J3 304 aa20.79■□□□□ 0.92
RTN1-202ENST00000342503 LTFP02788 710 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 NME3Q13232 169 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 MORF4L2Q15014 288 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 DNAJC21Q5F1R6 531 aaKnown RBP20.78■□□□□ 0.92
RTN1-202ENST00000342503 SLC7A14Q8TBB6 771 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 PIGVQ9NUD9 493 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 TET1Q8NFU7 2136 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 NDC80O14777 642 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 ACSL3O95573 720 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 GATMP50440 423 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 PCGF5Q86SE9 256 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 HOOK3Q86VS8 718 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 PSTKQ8IV42 348 aaKnown RBP20.78■□□□□ 0.92
RTN1-202ENST00000342503 ABI1Q8IZP0 508 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 CSPG4P5Q96PW8 444 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 TMPRSS4Q9NRS4 437 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 NINJ2Q9NZG7 142 aa20.78■□□□□ 0.92
RTN1-202ENST00000342503 CWC15Q9P013 229 aaKnown RBP20.78■□□□□ 0.92
RTN1-202ENST00000342503 FARP1Q9Y4F1 1045 aaPredicted RBP20.78■□□□□ 0.92
RTN1-202ENST00000342503 CEP350Q5VT06 3117 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 VWA8A3KMH1 1905 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 TTC4O95801 387 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 OR4Q2P0C623 313 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 NCAM1P13591 858 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 CTCFP49711 727 aaPredicted RBP20.77■□□□□ 0.92
RTN1-202ENST00000342503 KYNUQ16719 465 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 SKIDA1Q1XH10 827 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 PM20D1Q6GTS8 502 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 CEP128Q6ZU80 1094 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 SPATA2LQ8IUW3 424 aaPredicted RBP20.77■□□□□ 0.92
RTN1-202ENST00000342503 RELL1Q8IUW5 271 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 ADAM32Q8TC27 787 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 IRGQQ8WZA9 623 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 PRCCQ92733 491 aaPredicted RBP20.77■□□□□ 0.92
RTN1-202ENST00000342503 CASD1Q96PB1 797 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 USP3Q9Y6I4 520 aa20.77■□□□□ 0.92
RTN1-202ENST00000342503 TADA2AO75478 443 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 ZFXP17010 805 aaPredicted RBP20.76■□□□□ 0.91
RTN1-202ENST00000342503 GOT1P17174 413 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 STIP1P31948 543 aaKnown RBP20.76■□□□□ 0.91
RTN1-202ENST00000342503 ATN1P54259 1190 aaPredicted RBP20.76■□□□□ 0.91
RTN1-202ENST00000342503 NRLP54845 237 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 C4orf50Q6ZRC1 276 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 APBB2Q92870 758 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 SCLYQ96I15 445 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 RBM15Q96T37 977 aaKnown RBP eCLIP20.76■□□□□ 0.91
RTN1-202ENST00000342503 TMEM109Q9BVC6 243 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 USP29Q9HBJ7 922 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 LRFN2Q9ULH4 789 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 NOVA2Q9UNW9 492 aaKnown RBP20.76■□□□□ 0.91
RTN1-202ENST00000342503 SHOC2Q9UQ13 582 aa20.76■□□□□ 0.91
RTN1-202ENST00000342503 COL4A4P53420 1690 aaPredicted RBP20.76■□□□□ 0.91
RTN1-202ENST00000342503 TRAPPC3O43617 180 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms