RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KBTBD7Q8WVZ9 684 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 FIZ1Q96SL8 496 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 FERMT1Q9BQL6 677 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 IKZF4Q9H2S9 585 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 TUFT1Q9NNX1 390 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 RNF11Q9Y3C5 154 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 COL4A1P02462 1669 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 ZNFX1Q9P2E3 1918 aaKnown RBP19.13■□□□□ 0.65
SMPD1-201ENST00000342245 PRSS51A0A1B0GVH4 220 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 TRIM49D1C9J1S8 452 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 STAMBPO95630 424 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 HIBADHP31937 336 aaKnown RBP19.13■□□□□ 0.65
SMPD1-201ENST00000342245 GSSP48637 474 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 BBS9Q3SYG4 887 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 LRRC38Q5VT99 294 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 EGFLAMQ63HQ2 1017 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 CDHR3Q6ZTQ4 885 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 ENOSF1Q7L5Y1 443 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 RDH13Q8NBN7 331 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 HSPH1Q92598 858 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 NDEL1Q9GZM8 345 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 ARMC7Q9H6L4 198 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 TCRBV9S1A1TA0A576 114 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM114B3SHH9 223 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 ZBTB5O15062 677 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A9O60656 530 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 WEE2P0C1S8 567 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 COX4I1P13073 169 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 GYS1P13807 737 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A6P19224 532 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A1P22309 533 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A4P22310 534 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 CRHR1P34998 444 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 CA8P35219 290 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A3P35503 534 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A5P35504 534 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 NSFP46459 744 aaKnown RBP19.13■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF354CQ86Y25 554 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 GALNT4Q8N4A0 578 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 TFB1MQ8WVM0 346 aaKnown RBP19.13■□□□□ 0.65
SMPD1-201ENST00000342245 VCPIP1Q96JH7 1222 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 CTRCQ99895 268 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 APOL6Q9BWW8 343 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 CAAP1Q9H8G2 361 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 COPS7BQ9H9Q2 264 aaPredicted RBP19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A7Q9HAW7 530 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A10Q9HAW8 530 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 UGT1A8Q9HAW9 530 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 MAN1C1Q9NR34 630 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 NCKIPSDQ9NZQ3 722 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 EBF1Q9UH73 591 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 NOX1Q9Y5S8 564 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 DOT1LQ8TEK3 1739 aa19.13■□□□□ 0.65
SMPD1-201ENST00000342245 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 CFAP99D6REC4 459 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 MGEA5O60502 916 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 IFNB1P01574 187 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 SERPINB2P05120 415 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 MCF2P10911 925 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 POLR2EP19388 210 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 NDST2P52849 883 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 SIK1P57059 783 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 MCCD1P59942 119 aaPredicted RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 CBLBQ13191 982 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 ATP1A4Q13733 1029 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PDE1CQ14123 709 aaPredicted RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PHKG1Q16816 387 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PLA2G4FQ68DD2 849 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 CYP2U1Q7Z449 544 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PEX5LQ8IYB4 626 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 ADGRF4Q8IZF3 695 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 WRNIP1Q96S55 665 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 EIF2AK1Q9BQI3 630 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 VTA1Q9NP79 307 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 CCDC195A0A1B0GUA6 201 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 KDM1AO60341 852 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 JAK1P23458 1154 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 C6orf183Q5T699 404 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 KAZNQ674X7 775 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 FRMD7Q6ZUT3 714 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 JDP2Q8WYK2 163 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 NT5C1BQ96P26 610 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PSD2Q9BQI7 771 aa19.12■□□□□ 0.65
SMPD1-201ENST00000342245 WDR83Q9BRX9 315 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
SMPD1-201ENST00000342245 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 ATF7P17544 494 aaPredicted RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 MRPS5P82675 430 aaKnown RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 WDR78Q5VTH9 848 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 SLC7A5P1Q8MH63 180 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 SLC35B2Q8TB61 432 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 PTCD2Q8WV60 388 aaKnown RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 STRA6Q9BX79 667 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 OSBPL10Q9BXB5 764 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM9Q9P0T7 183 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 IP6K2Q9UHH9 426 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms