RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 EPSTI1Q96J88 318 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 SNX25Q9H3E2 840 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 PLK2Q9NYY3 685 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 IL37Q9NZH6 218 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 PCDHGB2Q9Y5G2 931 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 TK2O00142 265 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 PLK4O00444 970 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 GFRA2O00451 464 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 TLX3O43711 291 aaPredicted RBP17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 TACC1O75410 805 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 RTN3O95197 1032 aaPredicted RBP17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 TNNC2P02585 160 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 DGKGP49619 791 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 SLC5A3P53794 718 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 KIF19Q2TAC6 998 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 SYCP3Q8IZU3 236 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 ZNF843Q8N446 348 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 XPO6Q96QU8 1125 aaKnown RBP17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 KLF16Q9BXK1 252 aaPredicted RBP17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 MARK1Q9P0L2 795 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 SNX11Q9Y5W9 270 aa17.33■□□□□ 0.36
NECTIN1-202ENST00000340882 PRPF6O94906 941 aaKnown RBP17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 LONP1P36776 959 aaKnown RBP17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 IL12RB1P42701 662 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 TUBP50607 506 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 DUOXA2Q1HG44 320 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 IL27RAQ6UWB1 636 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 LAYNQ6UX15 382 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 TRAPPC11Q7Z392 1133 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 CACUL1Q86Y37 369 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 B3GALNT2Q8NCR0 500 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 SEL1LQ9UBV2 794 aa17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 R3HCC1Q9Y3T6 440 aaKnown RBP17.32■□□□□ 0.36
NECTIN1-202ENST00000340882 PLXNA2O75051 1894 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 FAM92AA1XBS5 289 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 TNFSF14O43557 240 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 COPAP53621 1224 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 KCNT1Q5JUK3 1230 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 PCSK4Q6UW60 755 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 FAM35AQ86V20 835 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 TMPRSS6Q8IU80 811 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 KIF2CQ99661 725 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 OSER1Q9NX31 292 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 WDR35Q9P2L0 1181 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 FBXO10Q9UK96 956 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 MYO18BQ8IUG5 2567 aa17.31■□□□□ 0.36
NECTIN1-202ENST00000340882 A8MXQ7 604 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 TLR5O60602 858 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 BEST1O76090 585 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 GAP43P17677 238 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 EIF2S3P41091 472 aaKnown RBP17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 ENPP2Q13822 863 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 GEN1Q17RS7 908 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 ZNF605Q86T29 641 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 SIPA1Q96FS4 1042 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 NACA2Q9H009 215 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 OLFML3Q9NRN5 406 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 THAP10Q9P2Z0 257 aaPredicted RBP17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
NECTIN1-202ENST00000340882 ZNF233A6NK53 670 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 MDM4O15151 490 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 IGLV3-19P01714 112 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 HLA-EP13747 358 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 CDH8P55286 799 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 IL9RQ01113 521 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 WDR49Q8IV35 697 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 C6orf106Q9H6K1 298 aaPredicted RBP17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 NUDT5Q9UKK9 219 aa17.29■□□□□ 0.36
NECTIN1-202ENST00000340882 COL5A1P20908 1838 aaPredicted RBP17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 H0Y8X5 98 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 CBX4O00257 560 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 IDEP14735 1019 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 PRKCHP24723 683 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 OXTRP30559 389 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 HOXD13P35453 343 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 STARD3Q14849 445 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 SUZ12Q15022 739 aaKnown RBP17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 Q6ZNB5 142 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 FUKQ8N0W3 1084 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 SNX19Q92543 992 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 ZNF516Q92618 1163 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 FCRL3Q96P31 734 aaPredicted RBP17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 SMOQ99835 787 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 MED10Q9BTT4 135 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 NUP58Q9BVL2 599 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 SMYD3Q9H7B4 428 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 NXF1Q9UBU9 619 aaKnown RBP17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 ANKRD6Q9Y2G4 727 aa17.28■□□□□ 0.36
NECTIN1-202ENST00000340882 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
NECTIN1-202ENST00000340882 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
NECTIN1-202ENST00000340882 DLATP10515 647 aaKnown RBP17.27■□□□□ 0.36
NECTIN1-202ENST00000340882 ACSL1P33121 698 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms