RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ALG6Q9Y672 507 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 IFRD1O00458 451 aaPredicted RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 JCHAINP01591 159 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 SERPINF2P08697 491 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 GJA5P36382 358 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 CASP5P51878 434 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 OCRLQ01968 901 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 SNX31Q8N9S9 440 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 FAM71DQ8N9W8 422 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIN54-201ENST00000340417 WDR91A4D1P6 747 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 NRP1O14786 923 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 CRTAMO95727 393 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 LIG3P49916 1009 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 MCL1Q07820 350 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 ARHGAP24Q8N264 748 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 RBM22Q9NW64 420 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIN54-201ENST00000340417 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 A6NNZ2 444 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 BAIAP3O94812 1187 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 TKTP29401 623 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 POM121L1PQ3SYA9 428 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 TUBB8Q3ZCM7 444 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 NT5DC1Q5TFE4 455 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 GOLGA8KD6RF30 607 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 NDUFAB1O14561 156 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 PER2O15055 1255 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 RHOBTB1O94844 696 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 F2P00734 622 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 FXR1P51114 621 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIN54-201ENST00000340417 DLG4P78352 724 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 APBA1Q02410 837 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 TAF10Q12962 218 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 PTK6Q13882 451 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 LENG9Q96B70 501 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 CASS4Q9NQ75 786 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 SERPINA4P29622 427 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 NOS2P35228 1153 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 SATB1Q01826 763 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 FUT2Q10981 343 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 HIC1Q14526 733 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 KIF19Q2TAC6 998 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 OR5B17Q8NGF7 314 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 G3BP2Q9UN86 482 aaKnown RBP13.24□□□□□ -0.29
LIN54-201ENST00000340417 IGLV3-22A0A075B6J6 115 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 TRUB2O95900 331 aaKnown RBP13.24□□□□□ -0.29
LIN54-201ENST00000340417 ERVK-10P10266 1014 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 MSH3P20585 1137 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 FDFT1P37268 417 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 PPP3CCP48454 512 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 LZTR1Q8N653 840 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 HSFY1Q96LI6 401 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D13Q9NVG8 400 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 KLHL14Q9P2G3 628 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 FGF18O76093 207 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 WASHC5Q12768 1159 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
LIN54-201ENST00000340417 ANKMY2Q8IV38 441 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 ZCCHC2Q9C0B9 1178 aaKnown RBP13.24□□□□□ -0.29
LIN54-201ENST00000340417 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 CNGA2Q16280 664 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 UGT3A1Q6NUS8 523 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 PRR23BQ6ZRT6 265 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 WHAMMQ8TF30 809 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 FGD4Q96M96 766 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 COG4Q9H9E3 785 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 SUN2Q9UH99 717 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 GSTA4O15217 222 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 MTA2O94776 668 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 GZMAP12544 262 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 CYP2F1P24903 491 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 PHKG1Q16816 387 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
LIN54-201ENST00000340417 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.24□□□□□ -0.29
LIN54-201ENST00000340417 ERVK-21P61565 698 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 SYDE1Q6ZW31 735 aaPredicted RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 CD274Q9NZQ7 290 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 POLBP06746 335 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 SEC13P55735 322 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 PRKAA1Q13131 559 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 BSNDQ8WZ55 320 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms