RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 OTUD1Q5VV17 481 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 CDKL3Q8IVW4 592 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 KLHDC8BQ8IXV7 354 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 PRELID2Q8N945 189 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 SLC39A13Q96H72 371 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 RNF157Q96PX1 679 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 DDX50Q9BQ39 737 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 TMLHEQ9NVH6 421 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 STOML2Q9UJZ1 356 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 UTP11Q9Y3A2 253 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 NUP210Q8TEM1 1887 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 KIF26AQ9ULI4 1882 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 GOLGA8SH3BPF8 625 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 IRAK2O43187 625 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 ATP2C2O75185 946 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 ITGB1P05556 798 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 ITIH2P19823 946 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 YWHAQP27348 245 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 FLT3P36888 993 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 BMPR1AP36894 532 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 EPHA5P54756 1037 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 VCPP55072 806 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 DPYSL3Q14195 570 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 VEPH1Q14D04 833 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 NOMO1Q15155 1222 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 RAB30Q15771 203 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 DUPD1Q68J44 220 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 TRNP1Q6NT89 227 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 C16orf59Q7L2K0 433 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 DEFB128Q7Z7B8 93 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 DEFB106AQ8N104 65 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 CCDC89Q8N998 374 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 PCDH18Q9HCL0 1135 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 RBM12Q9NTZ6 932 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 TMEM265A0A087WTH1 108 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 F8VP50 259 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 LIASO43766 372 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 RARAP10276 462 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 COG7P83436 770 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 MTMR3Q13615 1198 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 MANEALQ5VSG8 457 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 ZNF783Q6ZMS7 281 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 DDX42Q86XP3 938 aaKnown RBP eCLIP7.46□□□□□ -1.21
NUP43-201ENST00000340413 STKLD1Q8NE28 680 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 YME1L1Q96TA2 773 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 LBHD1Q9BQE6 289 aaPredicted RBP7.46□□□□□ -1.21
NUP43-201ENST00000340413 VN1R3Q9BXE9 311 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 ZWILCHQ9H900 591 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 PCDH9Q9HC56 1237 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 WDR6Q9NNW5 1121 aaKnown RBP7.46□□□□□ -1.21
NUP43-201ENST00000340413 ST7Q9NRC1 585 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 AMACRQ9UHK6 382 aa7.46□□□□□ -1.21
NUP43-201ENST00000340413 SLC38A8A6NNN8 435 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 KCNU1A8MYU2 1149 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 AP3B1O00203 1094 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ECEL1O95672 775 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 FYNP06241 537 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ADH1AP07327 375 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 LCP1P13796 627 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 BDNFP23560 247 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ACAT1P24752 427 aaKnown RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 DNAJB2P25686 324 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 SERPINB6P35237 376 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 GRIK1P39086 918 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ERVK-21P61565 698 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 DR1Q01658 176 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ROR1Q01973 937 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 DEUP1Q05D60 604 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 OASLQ15646 514 aaKnown RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 RTP2Q5QGT7 225 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 BTBD8Q5XKL5 378 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 LILRA6Q6PI73 481 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 CCNI2Q6ZMN8 369 aaPredicted RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 DENND5BQ6ZUT9 1274 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 UNC45BQ8IWX7 931 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ZNF557Q8N988 423 aaPredicted RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 AENQ8WTP8 325 aaKnown RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 VAT1Q99536 393 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ERP44Q9BS26 406 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 PLEKHA4Q9H4M7 779 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 SLC12A6Q9UHW9 1150 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 APOL1O14791 398 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 ZNF185O15231 689 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 VNN2O95498 520 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 OLFM2O95897 454 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 CALCAP01258 141 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ITGB8P26012 769 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ADRA1BP35368 520 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ARL4AP40617 200 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 DEFB103AP81534 67 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 DPYSQ14117 519 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 P3H1Q32P28 736 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 NUGGCQ68CJ6 796 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ALLCQ8N6M5 410 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms