RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 LMNAP02545 664 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 APOC2P02655 101 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 HMGCRP04035 888 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 LYNP07948 512 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 IMPDH2P12268 514 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 RGS7P49802 495 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 CDC16Q13042 620 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 XKR3Q5GH77 459 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 PCGF5Q86SE9 256 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 CAND1Q86VP6 1230 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 FGD4Q96M96 766 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 PLEKHG4BQ96PX9 1271 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 OATP04181 439 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 ATXN1P54253 815 aaKnown RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 TEX44Q53QW1 395 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 CYP4V2Q6ZWL3 525 aaPredicted RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 AGR3Q8TD06 166 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 ANKRD27Q96NW4 1050 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 R3HDMLQ9H3Y0 253 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 DHX33Q9H6R0 707 aaKnown RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 POPDC2Q9HBU9 364 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 PLLPQ9Y342 182 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 MFHAS1Q9Y4C4 1052 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 POLR2AP24928 1970 aaKnown RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 LOC100653049A0A140TA62 436 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 KRT34O76011 436 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 CXCL8P10145 99 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 RTP1P59025 263 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 PPP6R3Q5H9R7 873 aaPredicted RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 CFAP157Q5JU67 520 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 EEF1DP3Q658K8 133 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 SLC26A11Q86WA9 606 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 MYLK4Q86YV6 388 aaPredicted RBP12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 PCYT2Q99447 389 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 TRIM4Q9C037 500 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 VCXQ9H320 206 aa12.4□□□□□ -0.42
CCDC144CP-201ENST00000340196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 I3L4J1 428 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 M0QYV0 167 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 TRUB2O95900 331 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 KRT7P08729 469 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 TPP2P29144 1249 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ARRB2P32121 409 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ABCD1P33897 745 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 PTPN7P35236 360 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ARL2P36404 184 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 NAMPTP43490 491 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 UNC5AQ6ZN44 842 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 NIPA2Q8N8Q9 360 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 C12orf29Q8N999 325 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ALKBH8Q96BT7 664 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 MTBPQ96DY7 904 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 PPP1R36Q96LQ0 422 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 LPIN3Q9BQK8 851 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 OXCT2Q9BYC2 517 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 HBS1LQ9Y450 684 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 MSCO60682 206 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 METTL18O95568 372 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 HOXC6P09630 235 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ABCG1P45844 678 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 PGGT1BP53609 377 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 GHRHRQ02643 423 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 OLIG2Q13516 323 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 PRKG1Q13976 671 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 KRT72Q14CN4 511 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 SFT2D3Q587I9 215 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 DNAJC14Q6Y2X3 702 aaPredicted RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 NSUN6Q8TEA1 469 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 USP29Q9HBJ7 922 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 NGRNQ9NPE2 291 aaKnown RBP12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF358Q9NW07 568 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADCY6O43306 1168 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 OR6B1O95007 311 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 LSM8O95777 96 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms