RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SLC35B2Q8TB61 432 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 WDR6Q9NNW5 1121 aaKnown RBP22.08■■□□□ 1.13
VRK2-201ENST00000340157 FAM114A2Q9NRY5 505 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 ZDHHC18Q9NUE0 388 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 AP4E1Q9UPM8 1137 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 PCDHB5Q9Y5E4 795 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 SYNJ2BP-COX16A0A087WUM0 186 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 PECAM1P16284 738 aaPredicted RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 MAGEA11P43364 429 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 KRT81Q14533 505 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 DDR2Q16832 855 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 VSTM1Q6UX27 236 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 ZDHHC24Q6UX98 284 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 PQLC3Q8N755 202 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 SLC7A14Q8TBB6 771 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 ACTL9Q8TC94 416 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 NKD2Q969F2 451 aaPredicted RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 FAF2Q96CS3 445 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 CCDC114Q96M63 670 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 RNF157Q96PX1 679 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 KCTD15Q96SI1 283 aaPredicted RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 COX16Q9P0S2 106 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 FZD10Q9ULW2 581 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 MTMR11A4FU01 709 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 I6L893 689 aaPredicted RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 CAPN9O14815 690 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 ADAM12O43184 909 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 ARPP19P56211 112 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 OTUD4Q01804 1114 aaKnown RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 NME3Q13232 169 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 GPR17Q13304 367 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 PTK6Q13882 451 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 BYSLQ13895 437 aaKnown RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 KCNT2Q6UVM3 1135 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 RNF19BQ6ZMZ0 732 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 ANKS3Q6ZW76 656 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 VSIG1Q86XK7 387 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 PYROXD2Q8N2H3 581 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 PCDH19Q8TAB3 1148 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 C8orf48Q96LL4 319 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 DHX35Q9H5Z1 703 aaKnown RBP22.07■■□□□ 1.12
VRK2-201ENST00000340157 ANLNQ9NQW6 1124 aa22.07■■□□□ 1.12
VRK2-201ENST00000340157 TP73O15350 636 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 SOAT2O75908 522 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 CAPN2P17655 700 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 IVDP26440 423 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 VCPP55072 806 aaKnown RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 DEUP1Q05D60 604 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 IFRD2Q12894 506 aaPredicted RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 PPP1R7Q15435 360 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 ANKRD20A8PQ5CZ79 823 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 PPP6R3Q5H9R7 873 aaPredicted RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 OTOP2Q7RTS6 562 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 SCD5Q86SK9 330 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 PRUNE1Q86TP1 453 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 GLIS1Q8NBF1 620 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 TSEN2Q8NCE0 465 aaKnown RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 GRK7Q8WTQ7 553 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.06■■□□□ 1.12
VRK2-201ENST00000340157 PGAP3Q96FM1 320 aaPredicted RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 ZNF670Q9BS34 389 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 MCOLN1Q9GZU1 580 aa22.06■■□□□ 1.12
VRK2-201ENST00000340157 MRPL42Q9Y6G3 142 aaKnown RBP22.06■■□□□ 1.12
VRK2-201ENST00000340157 H7C4K7 107 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 APOC4-APOC2K7ER74 178 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 APOC2P02655 101 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 CPB1P15086 417 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 NNTQ13423 1086 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 TRIP13Q15645 432 aaPredicted RBP22.05■■□□□ 1.12
VRK2-201ENST00000340157 NPNTQ6UXI9 565 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 MAP7D3Q8IWC1 876 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 PLD5Q8N7P1 536 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 IL23AQ9NPF7 189 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 HPCAL4Q9UM19 191 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 ZNF487B1APH4 448 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 EFCAB14O75071 495 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 KLRC2P26717 231 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 USP46P62068 366 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 SYDE1Q6ZW31 735 aaPredicted RBP22.05■■□□□ 1.12
VRK2-201ENST00000340157 SLC39A11Q8N1S5 342 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 NMUR1Q9HB89 426 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 MTRRQ9UBK8 725 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 DRG1Q9Y295 367 aaKnown RBP22.05■■□□□ 1.12
VRK2-201ENST00000340157 SLC27A5Q9Y2P5 690 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 CDY1Q9Y6F8 540 aa22.05■■□□□ 1.12
VRK2-201ENST00000340157 TRIM66O15016 1216 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 BAIAP3O94812 1187 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 GAS8O95995 478 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 RPL17P18621 184 aaKnown RBP22.04■■□□□ 1.12
VRK2-201ENST00000340157 YWHAGP61981 247 aaKnown RBP eCLIP22.04■■□□□ 1.12
VRK2-201ENST00000340157 USP41Q3LFD5 358 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 SLC9A4Q6AI14 798 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 BEND5Q7L4P6 421 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 TAC4Q86UU9 113 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 CMTR2Q8IYT2 770 aaKnown RBP22.04■■□□□ 1.12
VRK2-201ENST00000340157 ALLCQ8N6M5 410 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 FBXO25Q8TCJ0 367 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 GPR152Q8TDT2 470 aa22.04■■□□□ 1.12
VRK2-201ENST00000340157 RIN2Q8WYP3 895 aaPredicted RBP22.04■■□□□ 1.12
VRK2-201ENST00000340157 C10orf88Q9H8K7 445 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms