RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 NME8Q8N427 588 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 TCP10LQ8TDR4 215 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 RNF157Q96PX1 679 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 MIS12Q9H081 205 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.96■□□□□ 0.31
LITAF-201ENST00000339430 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.96■□□□□ 0.31
LITAF-201ENST00000339430 EDF1O60869 148 aaKnown RBP16.96■□□□□ 0.31
LITAF-201ENST00000339430 ENDOD1O94919 500 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 NPTXRO95502 500 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 SLC18A1P54219 525 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 YWHAGP61981 247 aaKnown RBP eCLIP16.96■□□□□ 0.31
LITAF-201ENST00000339430 ITGA7Q13683 1181 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 CA9Q16790 459 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 CATSPER4Q7RTX7 472 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 TTC30AQ86WT1 665 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 MZB1Q8WU39 189 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 ZNF75CPQ92670 426 aaPredicted RBP16.96■□□□□ 0.31
LITAF-201ENST00000339430 WNT8BQ93098 351 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 ERP27Q96DN0 273 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 PPCSQ9HAB8 311 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 RAB6BQ9NRW1 208 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 SLC17A7Q9P2U7 560 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 HCRTO43612 131 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 SNX17Q15036 470 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 RASA2Q15283 850 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 GLRA4Q5JXX5 417 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 SERINC5Q86VE9 423 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 CFAP36Q96G28 342 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 DHRS4Q9BTZ2 278 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 SNTG2Q9NY99 539 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 CHKBQ9Y259 395 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 C2CD2Q9Y426 696 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 HES2Q9Y543 173 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 A0A1B0GUA9 196 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 TCRBV9S1A1TA0A576 114 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 CABYRO75952 493 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 TFE3P19532 575 aaPredicted RBP16.95■□□□□ 0.3
LITAF-201ENST00000339430 IL4RP24394 825 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 RBL1P28749 1068 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 STIP1P31948 543 aaKnown RBP16.95■□□□□ 0.3
LITAF-201ENST00000339430 TFDP2Q14188 446 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 KCNJ11Q14654 390 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 KBTBD12Q3ZCT8 623 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
LITAF-201ENST00000339430 OTOAQ7RTW8 1153 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 SESTD1Q86VW0 696 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 AGGF1Q8N302 714 aaeCLIP16.95■□□□□ 0.3
LITAF-201ENST00000339430 PLD5Q8N7P1 536 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 DNAJC5GQ8N7S2 189 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
LITAF-201ENST00000339430 PHACTR1Q9C0D0 580 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
LITAF-201ENST00000339430 MOXD2PA6NHM9 499 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ZWINTO95229 277 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ATP2A2P16615 1042 aaKnown RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 CRYBB1P53674 252 aaPredicted RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 PTK7Q13308 1070 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 OLFML1Q6UWY5 402 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 VSIG1Q86XK7 387 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 MAGEB5Q9BZ81 275 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 USP29Q9HBJ7 922 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ETNK1Q9HBU6 452 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 NPHS2Q9NP85 383 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 USH1CQ9Y6N9 552 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 HOXA11P31270 313 aaPredicted RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 YARSP54577 528 aaKnown RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 SETDB1Q15047 1291 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ASRGL1Q7L266 308 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ARRDC4Q8NCT1 418 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 CLEC4CQ8WTT0 213 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 TMEM237Q96Q45 408 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 CYTH2Q99418 400 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 SNRNP25Q9BV90 132 aaKnown RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 PCDH18Q9HCL0 1135 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 ARHGEF3Q9NR81 526 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 TRMT13Q9NUP7 481 aaKnown RBP16.94■□□□□ 0.3
LITAF-201ENST00000339430 FETUBQ9UGM5 382 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 TEX264Q9Y6I9 313 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 IKBKGQ9Y6K9 419 aa16.94■□□□□ 0.3
LITAF-201ENST00000339430 APOL1O14791 398 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 FAM155BO75949 473 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 CTSHP09668 335 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 SDC4P31431 198 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 ATXN1P54253 815 aaKnown RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 BCAR1P56945 870 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 MRPS6P82932 125 aaKnown RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 FAAP100Q0VG06 881 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 OVGP1Q12889 678 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 PRPF39Q86UA1 669 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms