RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 AP4E1Q9UPM8 1137 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 KIAA0100Q14667 2235 aaKnown RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 HMGB1P1B2RPK0 211 aaPredicted RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 NT5C1B-RDH14C9J2C7 533 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 H7C0C1 242 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 RPL9P32969 192 aaKnown RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 MAGEA4P43358 317 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 PTPN9P43378 593 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 ATP5OP48047 213 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 LHX1P48742 406 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 HNRNPH2P55795 449 aaKnown RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SF3A3Q12874 501 aaKnown RBP eCLIP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 TUSC3Q13454 348 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 AUHQ13825 339 aaKnown RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM26DQ5JW98 314 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 BHLHA9Q7RTU4 235 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 IGDCC3Q8IVU1 814 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 HACE1Q8IYU2 909 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SIX6OS1Q8N1H7 587 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 PRCCQ92733 491 aaPredicted RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SCLYQ96I15 445 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 CEP41Q9BYV8 373 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 CASP8AP2Q9UKL3 1982 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 NUP205Q92621 2012 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 RASGRF2O14827 1237 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 KCNN4O15554 427 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 CREB3O43889 395 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SHOX2O60902 331 aaPredicted RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NCAM1P13591 858 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ACTN2P35609 894 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 BASP1P80723 227 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC25A52Q3SY17 297 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC24A5Q71RS6 500 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ZDHHC17Q8IUH5 632 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ZBED8Q8IZ13 594 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 AGGF1Q8N302 714 aaeCLIP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC7A14Q8TBB6 771 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 CCDC110Q8TBZ0 833 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 GPR152Q8TDT2 470 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 CSPG4P5Q96PW8 444 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TSPAN18Q96SJ8 248 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 LGMNQ99538 433 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TRIM56Q9BRZ2 755 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 RGS18Q9NS28 235 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TBC1D13Q9NVG8 400 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC12A6Q9UHW9 1150 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 LCMT1Q9UIC8 334 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 FARP1Q9Y4F1 1045 aaPredicted RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ANKRD65E5RJM6 399 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ARVCFO00192 962 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 MCF2LO15068 1137 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 MDM4O15151 490 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SSTR1P30872 391 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 GBP1P32455 592 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ACADSBP45954 432 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 OR1G1P47890 313 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 DAOAP59103 153 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SKOR1P84550 965 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 GRIK3Q13003 919 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PDIA2Q13087 525 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 DPYSL2Q16555 572 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ZSCAN26Q16670 478 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 EFHC1Q5JVL4 640 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PDE4DIPQ5VU43 2346 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 OVOS1Q6IE37 1185 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM171BQ6P995 826 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 KDM7AQ6ZMT4 941 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TMEM86AQ8N2M4 240 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ZCCHC9Q8N567 271 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TTC9BQ8N6N2 239 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC43A3Q8NBI5 491 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NT5C3BQ969T7 300 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TLCD1Q96CP7 247 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PGLYRP2Q96PD5 576 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 DEFB118Q96PH6 123 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NPY6RQ99463 290 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM107BQ9H098 131 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 MLXIPLQ9NP71 852 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PPANQ9NQ55 473 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SZT2Q5T011 3432 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TDRD15B5MCY1 1934 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 MOXD2PA6NHM9 499 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 APOL1O14791 398 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 RGS16O15492 202 aaPredicted RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PQBP1O60828 265 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SOAT2O75908 522 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ODC1P11926 461 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 GRIA1P42261 906 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 GPR15P49685 360 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 CCL23P55773 120 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC8A3P57103 927 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 ROR1Q01973 937 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 LMNB2Q03252 620 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms