RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 YWHAZP63104 245 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BEX3Q00994 111 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GBE1Q04446 702 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SH2D5Q6ZV89 423 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PAQR9Q6ZVX9 377 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZNF534Q76KX8 674 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ARCQ7LC44 396 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TAX1BP1Q86VP1 789 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CAND1Q86VP6 1230 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZDHHC17Q8IUH5 632 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CCDC185Q8N715 623 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HAUS2Q9NVX0 235 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GGT7Q9UJ14 662 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 IPPQ9Y573 584 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HTTP42858 3142 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 H7C0C1 242 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 UBOX5O94941 541 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GSTA1P08263 222 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CYP2F1P24903 491 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CTGFP29279 349 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ATP5OP48047 213 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FAXCQ5TGI0 409 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KIAA0319Q5VV43 1072 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BNIPLQ7Z465 357 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 APBB1IPQ7Z5R6 666 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC2A14Q8TDB8 520 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NDRG1Q92597 394 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SSU72Q9NP77 194 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ETNK2Q9NVF9 386 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SENP1Q9P0U3 644 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SMG5Q9UPR3 1016 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TTLL3Q9Y4R7 772 aa13.49□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MEIS3P2A8K0S8 358 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KCNN4O15554 427 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CD4P01730 458 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MAGEA3P43357 314 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BCAR1P56945 870 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CTU1Q7Z7A3 348 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FAM228AQ86W67 206 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PDIK1LQ8N165 341 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ANKS4BQ8N8V4 417 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 C12orf65Q9H3J6 166 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 POPDC2Q9HBU9 364 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLCO1B3Q9NPD5 702 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PAK5Q9P286 719 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HEY1Q9Y5J3 304 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BEST1O76090 585 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 LCP1P13796 627 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KRT15P19012 456 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KRT4P19013 534 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 LILRA4P59901 499 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NCALDP61601 193 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ARHGEF6Q15052 776 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PDK4Q16654 411 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ECHDC2Q86YB7 292 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PYROXD2Q8N2H3 581 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BANPQ8N9N5 519 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC44A1Q8WWI5 657 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CLDN5O00501 218 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TNPO2O14787 897 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 METTL18O95568 372 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MYL3P08590 195 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 LRPAP1P30533 357 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PHBP35232 272 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TAF6P49848 677 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FCGRTP55899 365 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 IL9RQ01113 521 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DNAJC3Q13217 504 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FAM133BQ5BKY9 247 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NCBP2-AS2Q69YL0 99 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FAM47EQ6ZV65 393 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ADGRF2Q8IZF7 708 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GSTCDQ8NEC7 633 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms