RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TTC3P53804 2025 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 PTPRDP23468 1912 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.9■□□□□ 0.3
HPS1-202ENST00000338546 NRP1O14786 923 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 B4GALT3O60512 393 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
HPS1-202ENST00000338546 ALDH2P05091 517 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 FYNP06241 537 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 TFE3P19532 575 aaPredicted RBP16.9■□□□□ 0.3
HPS1-202ENST00000338546 BDNFP23560 247 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 ROR1Q01973 937 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 SCAPQ12770 1279 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 ELAVL2Q12926 359 aaKnown RBP16.9■□□□□ 0.3
HPS1-202ENST00000338546 GPS1Q13098 491 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 MMRN1Q13201 1228 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 AGBL2Q5U5Z8 902 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 LRRTM3Q86VH5 581 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 HOOK3Q86VS8 718 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 NPAS4Q8IUM7 802 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 HASPINQ8TF76 798 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 ATP6V1G3Q96LB4 118 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 ADAM33Q9BZ11 813 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 ADAM7Q9H2U9 754 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
HPS1-202ENST00000338546 FAM204AQ9H8W3 233 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 MTMR10Q9NXD2 777 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 TANC1Q9C0D5 1861 aa16.9■□□□□ 0.3
HPS1-202ENST00000338546 BCLAF3A2AJT9 711 aaKnown RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 OR6C75A6NL08 312 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 YJEFN3A6XGL0 299 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 E7ENQ6 273 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 M0QYT0 321 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 RIPK2O43353 540 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 PECAM1P16284 738 aaPredicted RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 CYP2F1P24903 491 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 ARL4AP40617 200 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 CACNA2D1P54289 1103 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 DEUP1Q05D60 604 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 SMARCB1Q12824 385 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 MRPL58Q14197 206 aaKnown RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 CA9Q16790 459 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 OTUD1Q5VV17 481 aaPredicted RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 VSTM1Q6UX27 236 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 ARL8AQ96BM9 186 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 RTP4Q96DX8 246 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 ROPN1BQ9BZX4 212 aaPredicted RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 HIPK3Q9H422 1215 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 ROPN1Q9HAT0 212 aaPredicted RBP16.89■□□□□ 0.3
HPS1-202ENST00000338546 TMEM30AQ9NV96 361 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 ADAM28Q9UKQ2 775 aa16.89■□□□□ 0.3
HPS1-202ENST00000338546 NLRC5Q86WI3 1866 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 SF3B1O75533 1304 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■■■■ 137.9
HPS1-202ENST00000338546 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 HTTP42858 3142 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 USP17L7P0C7H9 530 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 HCAR3P49019 387 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 VPS41P49754 854 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 IFFO1Q0D2I5 559 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 PPP6R3Q5H9R7 873 aaPredicted RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 EFHC2Q5JST6 749 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 RNASEH2BQ5TBB1 312 aaKnown RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 SYPL2Q5VXT5 272 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 DARS2Q6PI48 645 aaKnown RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 BHLHA9Q7RTU4 235 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 GPRIN1Q7Z2K8 1008 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 CCDC185Q8N715 623 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 NDRG1Q92597 394 aaKnown RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 KCTD15Q96SI1 283 aaPredicted RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 GPATCH2LQ9NWQ4 482 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 WBP1LQ9NX94 342 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.29
HPS1-202ENST00000338546 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.29
HPS1-202ENST00000338546 PCNTO95613 3336 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 H3BRJ5 948 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 TTC4O95801 387 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 IFNB1P01574 187 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 CAPN2P17655 700 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 FGFR3P22607 806 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 RFC2P35250 354 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 MAGEA11P43364 429 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 CBLBQ13191 982 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 SLC29A2Q14542 456 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 HFE2Q6ZVN8 426 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 CDKL3Q8IVW4 592 aaPredicted RBP16.88■□□□□ 0.29
HPS1-202ENST00000338546 PPIL6Q8IXY8 311 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 C8orf48Q96LL4 319 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 CDC42EP4Q9H3Q1 356 aaKnown RBP16.88■□□□□ 0.29
HPS1-202ENST00000338546 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 DNAJB4Q9UDY4 337 aa16.88■□□□□ 0.29
HPS1-202ENST00000338546 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
HPS1-202ENST00000338546 HACD1B0YJ81 288 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 TRIM66O15016 1216 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms