RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 DNAJC14Q6Y2X3 702 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 UTS2BQ765I0 119 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 MARK2Q7KZI7 788 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 BRSK2Q8IWQ3 736 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 LPCAT1Q8NF37 534 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 OMA1Q96E52 524 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TRPM5Q9NZQ8 1165 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 HEY2Q9UBP5 337 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CPA4Q9UI42 421 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PRKAB1Q9Y478 270 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 FAM220BPB1ANY3 271 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 IFNA16P05015 189 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 DMPKQ09013 629 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 STRIP1Q5VSL9 837 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ADAM30Q9UKF2 790 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 KIF1CO43896 1103 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 GLP2RO95838 553 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 FDX1P10109 184 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 LLGL2Q6P1M3 1020 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 JAMLQ86YT9 394 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ATXN3LQ9H3M9 355 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 STARD7Q9NQZ5 370 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 DDR2Q16832 855 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TIGD7Q6NT04 549 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 C11orf63Q6NUN7 778 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 AAR2Q9Y312 384 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 RFC5P40937 340 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 GFM2Q969S9 779 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 AKAP7Q9P0M2 348 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TPH1P17752 444 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 MAPK1P28482 360 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ISLR2Q6UXK2 745 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 DISP1Q96F81 1524 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ATG7O95352 703 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ITGALP20701 1170 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 SRP54P61011 504 aaKnown RBP12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 TCEAL5Q5H9L2 206 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 FAM131BQ86XD5 332 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 DEFB129Q9H1M3 183 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 DCDC2Q9UHG0 476 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
SHANK2-201ENST00000338508 SLC2A3P11169 496 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TPGS1Q6ZTW0 290 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 THG1LQ9NWX6 298 aaKnown RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SAC3D1A6NKF1 404 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 IDH3BO43837 385 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SGPL1O95470 568 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 RAG1P15918 1043 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 XRCC4Q13426 336 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 AGKQ53H12 422 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SCAIQ8N9R8 606 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TIPINQ9BVW5 301 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 KLHL28Q9NXS3 571 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 PPP1R37O75864 691 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 CRTAMO95727 393 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 ALDH2P05091 517 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 STX5Q13190 355 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 CAMK1Q14012 370 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 RIPOR1Q6ZS17 1223 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 RSPH1Q8WYR4 309 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 LPAR1Q92633 364 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 NCKAP1Q9Y2A7 1128 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SERPINB8P50452 374 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 CASP12Q6UXS9 341 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TRIM9Q9C026 710 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SCGNO76038 276 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms