RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TBC1D14Q9P2M4 693 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 SMG5Q9UPR3 1016 aaKnown RBP16.02■□□□□ 0.16
PRKN-201ENST00000338468 SPTBN2O15020 2390 aa16.02■□□□□ 0.15
PRKN-201ENST00000338468 MYOFQ9NZM1 2061 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 YJEFN3A6XGL0 299 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 E7ENQ6 273 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 PIK3R2O00459 728 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 KRT37O76014 449 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 RALAP11233 206 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 HOXC13P31276 330 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 GPD2P43304 727 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 DAOAP59103 153 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 ARHGAP8P85298 464 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 AMPD2Q01433 879 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 SATB1Q01826 763 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRKN-201ENST00000338468 NR1H3Q13133 447 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 KRT31Q15323 416 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 STX1AQ16623 288 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 LY6G5CQ5SRR4 150 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 Q6ZNB5 142 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 SCML4Q8N228 414 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 ARHGAP18Q8N392 663 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 SPEM1Q8N4L4 309 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 ZNF606Q8WXB4 792 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 CD101Q93033 1021 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 OTUB2Q96DC9 234 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 FAM81BQ96LP2 452 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 HSD3B7Q9H2F3 369 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 FANCLQ9NW38 375 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 ZSCAN32Q9NX65 697 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 CYTH4Q9UIA0 394 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
PRKN-201ENST00000338468 ANTXRLA6NF34 631 aa16■□□□□ 0.15
PRKN-201ENST00000338468 FOXN3O00409 490 aaPredicted RBP16■□□□□ 0.15
PRKN-201ENST00000338468 STC2O76061 302 aa16■□□□□ 0.15
PRKN-201ENST00000338468 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
PRKN-201ENST00000338468 KLKB1P03952 638 aa16■□□□□ 0.15
PRKN-201ENST00000338468 PNMA6AP0CW24 399 aaPredicted RBP16■□□□□ 0.15
PRKN-201ENST00000338468 LCP1P13796 627 aa16■□□□□ 0.15
PRKN-201ENST00000338468 GNA15P30679 374 aa16■□□□□ 0.15
PRKN-201ENST00000338468 SLC6A11P48066 632 aa16■□□□□ 0.15
PRKN-201ENST00000338468 EFEMP1Q12805 493 aa16■□□□□ 0.15
PRKN-201ENST00000338468 NCAPHQ15003 741 aa16■□□□□ 0.15
PRKN-201ENST00000338468 MEA1Q16626 185 aa16■□□□□ 0.15
PRKN-201ENST00000338468 BSPRYQ5W0U4 402 aa16■□□□□ 0.15
PRKN-201ENST00000338468 TMEM25Q86YD3 366 aa16■□□□□ 0.15
PRKN-201ENST00000338468 MIB1Q86YT6 1006 aa16■□□□□ 0.15
PRKN-201ENST00000338468 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
PRKN-201ENST00000338468 ZBTB44Q8NCP5 570 aa16■□□□□ 0.15
PRKN-201ENST00000338468 CLEC4CQ8WTT0 213 aa16■□□□□ 0.15
PRKN-201ENST00000338468 P2RY11Q96G91 374 aa16■□□□□ 0.15
PRKN-201ENST00000338468 HSFY1Q96LI6 401 aa16■□□□□ 0.15
PRKN-201ENST00000338468 EPC1Q9H2F5 836 aa16■□□□□ 0.15
PRKN-201ENST00000338468 CNGB3Q9NQW8 809 aa16■□□□□ 0.15
PRKN-201ENST00000338468 KIAA1549LQ6ZVL6 1849 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 K7ESF4 209 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 THAP12O43422 761 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 PAPSS2O95340 614 aaPredicted RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 ADH5P11766 374 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 DRD1P21728 446 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 CLCN1P35523 988 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 CCR3P51677 355 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 MYL5Q02045 173 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 TYRO3Q06418 890 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 KLHDC7AQ5VTJ3 777 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 TADA2BQ86TJ2 420 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 SFTPA1Q8IWL2 248 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 ETFBKMTQ8IXQ9 262 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 EDEM1Q92611 657 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 NAA15Q9BXJ9 866 aaKnown RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 VPS16Q9H269 839 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 SPHK2Q9NRA0 654 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 POLR3BQ9NW08 1133 aaPredicted RBP15.99■□□□□ 0.15
PRKN-201ENST00000338468 RASAL2Q9UJF2 1139 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 FHOD1Q9Y613 1164 aa15.99■□□□□ 0.15
PRKN-201ENST00000338468 K7EQS6 105 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 HOXC11O43248 304 aaPredicted RBP15.98■□□□□ 0.15
PRKN-201ENST00000338468 RNF40O75150 1001 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 ADH1CP00326 375 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 ZNF18P17022 549 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 USP8P40818 1118 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 CXCL12P48061 93 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
PRKN-201ENST00000338468 FAM71AQ8IYT1 594 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 PHTF2Q8N3S3 785 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 WDTC1Q8N5D0 677 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 IRGQQ8WZA9 623 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
PRKN-201ENST00000338468 SLC4A5Q9BY07 1137 aa15.98■□□□□ 0.15
PRKN-201ENST00000338468 MARCH2Q9P0N8 246 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms