RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 EGFLAMQ63HQ2 1017 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 KLHL10Q6JEL2 608 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 PGBD3Q8N328 593 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 C12orf50Q8NA57 414 aaPredicted RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 HMGB4Q8WW32 186 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 KAT5Q92993 513 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 OTUB2Q96DC9 234 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 TSG101Q99816 390 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 BBS2Q9BXC9 721 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 DNAJC17Q9NVM6 304 aaKnown RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 MBD1Q9UIS9 605 aaPredicted RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 RASAL2Q9UJF2 1139 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 DNMT3LQ9UJW3 386 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 NCOR2Q9Y618 2525 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 GON4LQ3T8J9 2241 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 TCRBV21S2A2A0A5A6 115 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 PIK3R2O00459 728 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 TM4SF5O14894 197 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 GABBR2O75899 941 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 SMC2O95347 1197 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 CAVIN2O95810 425 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 STX17P56962 302 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 CUL2Q13617 745 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 GOLGA7BQ2TAP0 167 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 COBLL1Q53SF7 1204 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ARHGAP17Q68EM7 881 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 Q6ZNB5 142 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ARMCX6Q7L4S7 300 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 CCDC186Q7Z3E2 898 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 TMEFF1Q8IYR6 380 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ANKRD52Q8NB46 1076 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 OLIG1Q8TAK6 271 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 SLC35C1Q96A29 364 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 CNOT6LQ96LI5 555 aaKnown RBP14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 TIGD1Q96MW7 591 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ULBP1Q9BZM6 244 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 SLC6A17Q9H1V8 727 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 ARMCX3Q9UH62 379 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 CLEC4EQ9ULY5 219 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 RAD54BQ9Y620 910 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 LAMA1P25391 3075 aa14.05□□□□□ -0.16
NUDCD3-201ENST00000338427 SLC12A8A0AV02 714 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 STX10O60499 249 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 CD19P15391 556 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 DHPSP49366 369 aaPredicted RBP14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 TKTL1P51854 596 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 ELF2Q15723 593 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 MAP7D1Q3KQU3 841 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 EOGTQ5NDL2 527 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 PMS2CLQ68D20 193 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 GRAMD4Q6IC98 578 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 KIAA1211LQ6NV74 962 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 BHLHA9Q7RTU4 235 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 UBR7Q8N806 425 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 TERB1Q8NA31 727 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 CCDC26Q8TAB7 109 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 PIGKQ92643 395 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 CCDC34Q96HJ3 373 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 UBXN6Q9BZV1 441 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 PNPLA8Q9NP80 782 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 VPS45Q9NRW7 570 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 TMEM74BQ9NUR3 256 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 BCCIPQ9P287 314 aaKnown RBP eCLIP14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 LSM7Q9UK45 103 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 TSPAN16Q9UKR8 245 aa14.04□□□□□ -0.16
NUDCD3-201ENST00000338427 A0A1W2PQF6 199 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 SLC16A3O15427 465 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 MAP3K13O43283 966 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 RALAP11233 206 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 GABRG2P18507 467 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 TRIM21P19474 475 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 P2RY2P41231 377 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 PTGER3P43115 390 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 FMO5P49326 533 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 RGS7P49802 495 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 IRX4P78413 519 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 KLHDC10Q6PID8 442 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 RRAGAQ7L523 313 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 DENND1CQ8IV53 801 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 LMO3Q8TAP4 145 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 NELFBQ8WX92 580 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 EDEM1Q92611 657 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 DHTKD1Q96HY7 919 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 CNTNAP3Q9BZ76 1288 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 POLMQ9NP87 494 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 CD93Q9NPY3 652 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 FSCN3Q9NQT6 498 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms