RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 IGSF21Q96ID5 467 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 RNF157Q96PX1 679 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 SLC9A7Q96T83 725 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 FAM118BQ9BPY3 351 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 TRIM62Q9BVG3 475 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 MTMR10Q9NXD2 777 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 GRHL1Q9NZI5 618 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 FAM153AQ9UHL3 310 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 AP4E1Q9UPM8 1137 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 APOC4-APOC2K7ER74 178 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 APOC2P02655 101 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 NCAM1P13591 858 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 L1CAMP32004 1257 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 RPL21P46778 160 aaKnown RBP16.1■□□□□ 0.17
LIMS1-202ENST00000338045 VCPP55072 806 aaKnown RBP16.1■□□□□ 0.17
LIMS1-202ENST00000338045 TFDP2Q14188 446 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 PPP1R7Q15435 360 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 BSPRYQ5W0U4 402 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 FAM131BQ86XD5 332 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 GDAP1L1Q96MZ0 367 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 VN1R3Q9BXE9 311 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 TRIM31Q9BZY9 425 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 ZDHHC18Q9NUE0 388 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 FZD10Q9ULW2 581 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 SNX24Q9Y343 169 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 CLGNO14967 610 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 ITGAVP06756 1048 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 TNNT3P45378 269 aaPredicted RBP16.1■□□□□ 0.17
LIMS1-202ENST00000338045 DEUP1Q05D60 604 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 USP41Q3LFD5 358 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 ZDHHC24Q6UX98 284 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 CMTR2Q8IYT2 770 aaKnown RBP16.1■□□□□ 0.17
LIMS1-202ENST00000338045 MREGQ8N565 214 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 ATAD1Q8NBU5 361 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 SPPL2BQ8TCT7 592 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 CCDC114Q96M63 670 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 FAM129AQ9BZQ8 928 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 WDR6Q9NNW5 1121 aaKnown RBP16.1■□□□□ 0.17
LIMS1-202ENST00000338045 IL23AQ9NPF7 189 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
LIMS1-202ENST00000338045 MTMR11A4FU01 709 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 IVDP26440 423 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 AIF1P55008 147 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 DYNLT1P63172 113 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
LIMS1-202ENST00000338045 ANKRD20A8PQ5CZ79 823 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 SLC9A4Q6AI14 798 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 SLC8B1Q6J4K2 584 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 SCN4BQ8IWT1 228 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 PQLC3Q8N755 202 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 SLC7A14Q8TBB6 771 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 C2orf15Q8WU43 125 aaKnown RBP16.09■□□□□ 0.17
LIMS1-202ENST00000338045 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 NTAN1Q96AB6 310 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 PGLYRP2Q96PD5 576 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 MAK16Q9BXY0 300 aaKnown RBP16.09■□□□□ 0.17
LIMS1-202ENST00000338045 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 RCOR3Q9P2K3 495 aaPredicted RBP16.09■□□□□ 0.17
LIMS1-202ENST00000338045 MTRRQ9UBK8 725 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 BACE2Q9Y5Z0 518 aa16.09■□□□□ 0.17
LIMS1-202ENST00000338045 CARNS1A5YM72 827 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 VNN2O95498 520 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 F9P00740 461 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 IGLV3-25P01717 112 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 ACRP10323 421 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 CPB1P15086 417 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 KLRC2P26717 231 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 SCAPQ12770 1279 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 EIF4EBP2Q13542 120 aaPredicted RBP16.08■□□□□ 0.17
LIMS1-202ENST00000338045 TMCO2Q7Z6W1 182 aaPredicted RBP16.08■□□□□ 0.17
LIMS1-202ENST00000338045 NUP93Q8N1F7 819 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 SLC39A11Q8N1S5 342 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 ALLCQ8N6M5 410 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 PCDH19Q8TAB3 1148 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 HAUS1Q96CS2 278 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 KCTD15Q96SI1 283 aaPredicted RBP16.08■□□□□ 0.17
LIMS1-202ENST00000338045 DHX35Q9H5Z1 703 aaKnown RBP16.08■□□□□ 0.17
LIMS1-202ENST00000338045 SAE1Q9UBE0 346 aaPredicted RBP16.08■□□□□ 0.17
LIMS1-202ENST00000338045 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 SCML2Q9UQR0 700 aa16.08■□□□□ 0.17
LIMS1-202ENST00000338045 FAM92AA1XBS5 289 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 TP73O15350 636 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.16
LIMS1-202ENST00000338045 TGM2P21980 687 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 YWHAGP61981 247 aaKnown RBP eCLIP16.08■□□□□ 0.16
LIMS1-202ENST00000338045 NME3Q13232 169 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 NOMO1Q15155 1222 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 DDR2Q16832 855 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.16
LIMS1-202ENST00000338045 RNF19BQ6ZMZ0 732 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 SCD5Q86SK9 330 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 PLD5Q8N7P1 536 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 CCDC89Q8N998 374 aa16.08■□□□□ 0.16
LIMS1-202ENST00000338045 EDEM1Q92611 657 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms