RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 HMGB4Q8WW32 186 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 PIGKQ92643 395 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 TWNKQ96RR1 684 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 TSG101Q99816 390 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 CYLDQ9NQC7 956 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 A0A1W2PQH9 124 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 C4orf47A7E2U8 309 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 NEDD8-MDP1E9PL57 170 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TM4SF5O14894 197 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 CILPO75339 1184 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TYRP14679 529 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 NTSR1P30989 418 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 P2RY2P41231 377 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 DPP6P42658 865 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 PGFP49763 221 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 KLHDC10Q6PID8 442 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 ETFBKMTQ8IXQ9 262 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TMEFF1Q8IYR6 380 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 ARHGAP18Q8N392 663 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 OLIG1Q8TAK6 271 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 NUP205Q92621 2012 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
CAPN3-202ENST00000337571 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
CAPN3-202ENST00000337571 TMEM9BQ9NQ34 198 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAPN3-202ENST00000337571 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
CAPN3-202ENST00000337571 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 STARD13Q9Y3M8 1113 aa11.22□□□□□ -0.61
CAPN3-202ENST00000337571 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 AP5Z1O43299 807 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 ADAM23O75077 832 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 SMC2O95347 1197 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 HOXB2P14652 356 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 BCKDHBP21953 392 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 CHKAP35790 457 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 WASP42768 502 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 DGKGP49619 791 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 MXI1P50539 228 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 KIF11P52732 1056 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 COG7P83436 770 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 LMAN2Q12907 356 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 E2F5Q15329 346 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-202ENST00000337571 TCERG1LQ5VWI1 586 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
CAPN3-202ENST00000337571 GPRIN1Q7Z2K8 1008 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 CCDC186Q7Z3E2 898 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 MIB1Q86YT6 1006 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 PHTF2Q8N3S3 785 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 ZNF276Q8N554 614 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 WBP2Q969T9 261 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.61
CAPN3-202ENST00000337571 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 DCLK3Q9C098 648 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-202ENST00000337571 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 CISHQ9NSE2 258 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 OSER1Q9NX31 292 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 NUDT5Q9UKK9 219 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 ANGPTL2Q9UKU9 493 aa11.21□□□□□ -0.61
CAPN3-202ENST00000337571 LNP1A1A4G5 178 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 CACNG3O60359 315 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 ZNF217O75362 1048 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 KCNK5O95279 499 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 CYBBP04839 570 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 HNRNPLP14866 589 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 ATXN3P54252 364 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 IRX4P78413 519 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 EFEMP1Q12805 493 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 DCAF17Q5H9S7 520 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms