RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 XRCC4Q13426 336 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 SLC25A52Q3SY17 297 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 WDR83Q9BRX9 315 aaKnown RBP17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 MED10Q9BTT4 135 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 ADAM33Q9BZ11 813 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 ACSS3Q9H6R3 686 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.36
TMEM39B-201ENST00000336294 PRPF4O43172 522 aaKnown RBP eCLIP17.32■□□□□ 0.361e-5■■■■□ 19.3
TMEM39B-201ENST00000336294 THP07101 528 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 GSTA1P08263 222 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SULT1E1P49888 294 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SLC18A1P54219 525 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 MRPS5P82675 430 aaKnown RBP17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 CBLBQ13191 982 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 PKN2Q16513 984 aaKnown RBP17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SERINC5Q86VE9 423 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 DEFB106AQ8N104 65 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 CCDC185Q8N715 623 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 GDAP1Q8TB36 358 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 FAM149B1Q96BN6 582 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SENP8Q96LD8 212 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 MAGEB18Q96M61 343 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SMC6Q96SB8 1091 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 KCTD15Q96SI1 283 aaPredicted RBP17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 KLC2Q9H0B6 622 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 LRRC4Q9HBW1 653 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
TMEM39B-201ENST00000336294 SCN10AQ9Y5Y9 1956 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 TCP11X1B4DZS4 312 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CLDN5O00501 218 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 PGK1P00558 417 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CTSHP09668 335 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 LHX1P48742 406 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 ADCY1Q08828 1119 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 MDH1BQ5I0G3 518 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 SIX6OS1Q8N1H7 587 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CSPG4P5Q96PW8 444 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 GAD1Q99259 594 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 ELAC2Q9BQ52 826 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 RCOR3Q9P2K3 495 aaPredicted RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 MEIS3P2A8K0S8 358 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 FAM155AB1AL88 458 aaPredicted RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 GPR182O15218 404 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 SPAG6O75602 509 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CHRNA1P02708 482 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 FAM200BP0CF97 657 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 NOS2P35228 1153 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 ARL4AP40617 200 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 ELK3P41970 407 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 YWHAZP63104 245 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 IL9RQ01113 521 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 SWT1Q5T5J6 900 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 FBXW10Q5XX13 1052 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CLEC20AQ6ZU45 233 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 PAQR9Q6ZVX9 377 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 RPAINQ86UA6 219 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 GSTCDQ8NEC7 633 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 TRIB2Q92519 343 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CCT6BQ92526 530 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 DHRS4Q9BTZ2 278 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 ETNK2Q9NVF9 386 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 FZD10Q9ULW2 581 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 STAP1Q9ULZ2 295 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
TMEM39B-201ENST00000336294 CA12O43570 354 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 DNAJC8O75937 253 aaPredicted RBP17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 MAGEA6P43360 314 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 NKX3-2P78367 333 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 MGAT3Q09327 533 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 ADGRD1Q6QNK2 874 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 DSTYKQ6XUX3 929 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 WNT8BQ93098 351 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 MRRFQ96E11 262 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 QKIQ96PU8 341 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 TGS1Q96RS0 853 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 PAFAH2Q99487 392 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 SYT15Q9BQS2 421 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 KRT82Q9NSB4 513 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 TEX264Q9Y6I9 313 aa17.3■□□□□ 0.36
TMEM39B-201ENST00000336294 SEPT4O43236 478 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 SPAG7O75391 227 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 RASSF9O75901 435 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 BEST1O76090 585 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 FBXO21O94952 628 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 MAP3K6O95382 1288 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 RPL9P32969 192 aaKnown RBP17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 MSH2P43246 934 aa17.29■□□□□ 0.36
TMEM39B-201ENST00000336294 GBE1Q04446 702 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms