RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 RPL22P35268 128 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 OR1G1P47890 313 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 ATP5OP48047 213 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 BCAR1P56945 870 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 MORF4L2Q15014 288 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 MTFR1Q15390 333 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 MAPRE1Q15691 268 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 PLEKHG4Q58EX7 1191 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 B4GALNT4Q76KP1 1039 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 CTU1Q7Z7A3 348 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 ZC3H18Q86VM9 953 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 SEPT8Q92599 483 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 NRDE2Q9H7Z3 1164 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 NINJ2Q9NZG7 142 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 ZBED1O96006 694 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 CEP128Q6ZU80 1094 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 BHLHA9Q7RTU4 235 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 BCCIPQ9P287 314 aaKnown RBP eCLIP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 DNAJB4Q9UDY4 337 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 SHOC2Q9UQ13 582 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 NLRC5Q86WI3 1866 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 CAPN9O14815 690 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 ACSL3O95573 720 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 LTFP02788 710 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 NR1D1P20393 614 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 SKOR1P84550 965 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 NME3Q13232 169 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 TCTN1Q2MV58 587 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PSTKQ8IV42 348 aaKnown RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 SLC7A14Q8TBB6 771 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PCDHB7Q9Y5E2 793 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
ZNF548-201ENST00000336128 PATJQ8NI35 1801 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 TTC4O95801 387 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 CCL5P13501 91 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 GATMP50440 423 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 KYNUQ16719 465 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 SPATA2LQ8IUW3 424 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 ABI1Q8IZP0 508 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 IRGQQ8WZA9 623 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 NOVA2Q9UNW9 492 aaKnown RBP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 USP3Q9Y6I4 520 aa12.93□□□□□ -0.34
ZNF548-201ENST00000336128 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-201ENST00000336128 CFAP69A5D8W1 941 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 SMIM23A6NLE4 172 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 GOT1P17174 413 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 STIP1P31948 543 aaKnown RBP12.92□□□□□ -0.34
ZNF548-201ENST00000336128 ARL4AP40617 200 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 MAGEA4P43358 317 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 DMTNQ08495 405 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 ANKRD22Q5VYY1 191 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 CROCCP2Q86T23 111 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 SCML4Q8N228 414 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 EPS8L3Q8TE67 593 aaKnown RBP12.92□□□□□ -0.34
ZNF548-201ENST00000336128 CPT1BQ92523 772 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 CASD1Q96PB1 797 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 SAYSD1Q9NPB0 183 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TMPRSS4Q9NRS4 437 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 RCOR3Q9P2K3 495 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-201ENST00000336128 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 PTPRDP23468 1912 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TANC1Q9C0D5 1861 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 H3BRJ5 948 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TADA2AO75478 443 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms