RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 SCAPQ12770 1279 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 XRCC4Q13426 336 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 P3H1Q32P28 736 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 CEP85LQ5SZL2 805 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 RNASEH2BQ5TBB1 312 aaKnown RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 GSTA5Q7RTV2 222 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 LRRTM3Q86VH5 581 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 ZCCHC9Q8N567 271 aaKnown RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 CASD1Q96PB1 797 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 TMEM121Q9BTD3 319 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 DMAP1Q9NPF5 467 aaPredicted RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 TMLHEQ9NVH6 421 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 CALCOCO1Q9P1Z2 691 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 TPX2Q9ULW0 747 aaKnown RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
LMO1-201ENST00000335790 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
LMO1-201ENST00000335790 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.16
LMO1-201ENST00000335790 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 BCLAF3A2AJT9 711 aaKnown RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 APOL1O14791 398 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 HOXA2O43364 376 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 TRAPPC3O43617 180 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 ZBED1O96006 694 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 LTFP02788 710 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 MYZAPP0CAP1 466 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 RBP3P10745 1247 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 CCL5P13501 91 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 RDXP35241 583 aaKnown RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 CHKAP35790 457 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 DYNLT1P63172 113 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 YWHAHQ04917 246 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 MRPL58Q14197 206 aaKnown RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 MTFR1Q15390 333 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 PAN2Q504Q3 1202 aaKnown RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 DENND2CQ68D51 928 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 HFE2Q6ZVN8 426 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 GPRIN1Q7Z2K8 1008 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 FAM76AQ8TAV0 307 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 P3H4Q92791 437 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 FAM149B1Q96BN6 582 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 HAUS1Q96CS2 278 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMO1-201ENST00000335790 DEFB118Q96PH6 123 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 TRIM62Q9BVG3 475 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 ROPN1BQ9BZX4 212 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 ZCWPW1Q9H0M4 648 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 CDC42EP4Q9H3Q1 356 aaKnown RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 NRDE2Q9H7Z3 1164 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 ROPN1Q9HAT0 212 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 USP29Q9HBJ7 922 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 GPATCH2LQ9NWQ4 482 aa14.03□□□□□ -0.16
LMO1-201ENST00000335790 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 SAE1Q9UBE0 346 aaPredicted RBP14.03□□□□□ -0.16
LMO1-201ENST00000335790 GOLGA6L10A6NI86 522 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 A6NNZ2 444 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 E7ENQ6 273 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 SGK1O00141 431 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TNFRSF10BO14763 440 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TCEA3O75764 348 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TTC4O95801 387 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 CYP2F1P24903 491 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 RPL22P35268 128 aaKnown RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 ZNF135P52742 658 aaPredicted RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 ATXN1P54253 815 aaKnown RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 BCAR1P56945 870 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 ROR1Q01973 937 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 GPS1Q13098 491 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 EIF4EBP2Q13542 120 aaPredicted RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 SLC29A2Q14542 456 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TUBB8Q3ZCM7 444 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 DCAF6Q58WW2 860 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TNFAIP8L3Q5GJ75 292 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 SYPL2Q5VXT5 272 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 C4orf22Q6V702 233 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 UNC45BQ8IWX7 931 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 CCDC185Q8N715 623 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 OR2W6PQ8NHA6 318 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 PGM2Q96G03 612 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 CSPG4P5Q96PW8 444 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TMEM209Q96SK2 561 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 TMEM175Q9BSA9 504 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 WDR6Q9NNW5 1121 aaKnown RBP14.02□□□□□ -0.17
LMO1-201ENST00000335790 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
LMO1-201ENST00000335790 LTBP2Q14767 1821 aa14.01□□□□□ -0.17
LMO1-201ENST00000335790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.01□□□□□ -0.17
LMO1-201ENST00000335790 F8W810 466 aa14.01□□□□□ -0.17
LMO1-201ENST00000335790 M0QYT0 321 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms