RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SYPL2Q5VXT5 272 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 KLHDC10Q6PID8 442 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 H2AFVQ71UI9 128 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 BEND5Q7L4P6 421 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ARID3BQ8IVW6 561 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 CCDC112Q8NEF3 446 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ST13P5Q8NFI4 369 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SMARCD2Q92925 531 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ASB16Q96NS5 453 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 EIF3CQ99613 913 aaKnown RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 PACSIN1Q9BY11 444 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 THAP2Q9H0W7 228 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 MYO1AQ9UBC5 1043 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 RASAL2Q9UJF2 1139 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 DNMT3LQ9UJW3 386 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 TMEM59LQ9UK28 342 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 CPQQ9Y646 472 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 C5orf42Q9H799 3197 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 DOCK8Q8NF50 2099 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 TCRBV5S1A1TA0A578 114 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 SIGLEC16A6NMB1 481 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 LCA5LO95447 670 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 PRAMEF12O95522 483 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 KRT3P12035 628 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 BMP1P13497 986 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 WEE1P30291 646 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 MAGEA1P43355 309 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 SLC7A9P82251 487 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 CCDC173Q0VFZ6 552 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 C10orf76Q5T2E6 689 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 PLEKHA7Q6IQ23 1121 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 MSANTD2Q6P1R3 559 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 MIB1Q86YT6 1006 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 PLCD3Q8N3E9 789 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 JOSD2Q8TAC2 188 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 MARCH2Q9P0N8 246 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 SFMBT1Q9UHJ3 866 aa14.72□□□□□ -0.05
APOBEC3B-202ENST00000335760 NUP210Q8TEM1 1887 aaPredicted RBP14.71□□□□□ -0.05
APOBEC3B-202ENST00000335760 DPYSL4O14531 572 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 IPO7O95373 1038 aaKnown RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 TMEM253P0C7T8 217 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 NOS2P35228 1153 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 FLT3P36888 993 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 VIPR2P41587 438 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 MATKP42679 507 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 MAMLD1Q13495 774 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 PPP1R15BQ5SWA1 713 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 DCUN1D2Q6PH85 259 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 PARM1Q6UWI2 310 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 TAC4Q86UU9 113 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ADHFE1Q8IWW8 467 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ZDHHC14Q8IZN3 488 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 EMC1Q8N766 993 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 TTC16Q8NEE8 873 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ADAM32Q8TC27 787 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 RXFP2Q8WXD0 754 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 CTNNBL1Q8WYA6 563 aaPredicted RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 USP13Q92995 863 aaPredicted RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ARHGEF26Q96DR7 871 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 MCEEQ96PE7 176 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 KLF16Q9BXK1 252 aaPredicted RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 TRPV4Q9HBA0 871 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ZFP14Q9HCL3 533 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 MRPL47Q9HD33 250 aaKnown RBP14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 GKN1Q9NS71 199 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 PRKAG3Q9UGI9 489 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 LIMD1Q9UGP4 676 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 ARHGAP26Q9UNA1 814 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 CCL26Q9Y258 94 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 PCDHA13Q9Y5I0 950 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 SCINQ9Y6U3 715 aa14.71□□□□□ -0.06
APOBEC3B-202ENST00000335760 SLC12A8A0AV02 714 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 LOC730098B7Z3J9 87 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 LEFTY2O00292 366 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 NRDCO43847 1150 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 CYP1A2P05177 515 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 HMBSP08397 361 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 FCARP24071 287 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 RFC1P35251 1148 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 RPL7AP62424 266 aaKnown RBP14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 PITX1P78337 314 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 CCZ1BP86790 482 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 CCZ1P86791 482 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 ZXDBP98169 803 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 ZP2Q05996 745 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 TANGO2Q6ICL3 276 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 MTSS1LQ765P7 747 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 ARCQ7LC44 396 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 CELF5Q8N6W0 485 aaKnown RBP14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 ACRBPQ8NEB7 543 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 SH3RF2Q8TEC5 729 aa14.7□□□□□ -0.06
APOBEC3B-202ENST00000335760 RSPRY1Q96DX4 576 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms