RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 FRMD8P1Q9BZ68 369 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 UNKQ9C0B0 810 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ADAMTS12P58397 1594 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 H7C1W4 665 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PSMD11O00231 422 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SSNA1O43805 119 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PMPCBO75439 489 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 WARSP23381 471 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 IL12AP29459 219 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 RFX3P48380 749 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 CASP4P49662 377 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 LSM3P62310 102 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PGBD2Q6P3X8 592 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 NACC2Q96BF6 587 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 TPD52L3Q96J77 140 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 RBP5P82980 135 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 N4BP2L1Q5TBK1 243 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PTPRHQ9HD43 1115 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ERAP1Q9NZ08 941 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DSEQ9UL01 958 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 HBS1LQ9Y450 684 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ABCB1P08183 1280 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 S100A1P23297 94 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PRDX5P30044 214 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 MAPKAPK2P49137 400 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 EFNA5P52803 228 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SIK1P57059 783 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PYDC2Q56P42 97 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 MACC1Q6ZN28 852 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SNX32Q86XE0 403 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 C8orf59Q8N0T1 100 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF75CPQ92670 426 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 GPRASP2Q96D09 838 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ING4Q9UNL4 249 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 BIRC5O15392 142 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 PKNOX1P55347 436 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NPEPPSP55786 919 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 EPS8Q12929 822 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TRIM32Q13049 653 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ARHGEF7Q14155 803 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CSHL1Q14406 222 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 STX12Q86Y82 276 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 FAM136AQ96C01 138 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SH3GLB1Q9Y371 365 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ZSCAN5CA6NGD5 496 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 PROCP04070 461 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GRIK3Q13003 919 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM132DQ14C87 1099 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TTMPQ5BVD1 217 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NET1Q7Z628 596 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CENPIQ92674 756 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 KLHL32Q96NJ5 620 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM121Q9BTD3 319 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SNX8Q9Y5X2 465 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ATP7AQ04656 1500 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 MRASO14807 208 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 MYL12AP19105 171 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GPC1P35052 558 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF846Q147U1 533 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TMC3Q7Z5M5 1100 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ZBTB46Q86UZ6 589 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SUN5Q8TC36 379 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SPPL2AQ8TCT8 520 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 AENQ8WTP8 325 aaKnown RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 KAT2BQ92831 832 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SPATA33Q96N06 139 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 MLPHQ9BV36 600 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 RAD18Q9NS91 495 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NDUFAF1Q9Y375 327 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ANXA9O76027 345 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 PON1P27169 355 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 STARP49675 285 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CRNNQ9UBG3 495 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 PCDHA10Q9Y5I2 948 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ANXA11P50995 505 aaKnown RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ARF5P84085 180 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms