RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 MRPL45Q9BRJ2 306 aaKnown RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 ABHD16BQ9H3Z7 469 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 ETNK1Q9HBU6 452 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 EIF2B3Q9NR50 452 aaKnown RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 GGT7Q9UJ14 662 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 MTO1Q9Y2Z2 717 aaKnown RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 FAM159BA6NKW6 160 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 PIRO00625 290 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 KRT38O76015 456 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 T-ENOLP0DO92 83 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 KCNE1P15382 129 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CYP2F1P24903 491 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 RBL1P28749 1068 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 PTPN4P29074 926 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GJA5P36382 358 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 FDFT1P37268 417 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 YWHAGP61981 247 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GRB14Q14449 540 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 DGKDQ16760 1214 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 WASHC2DQ5SRD0 308 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 C9orf57Q5W0N0 161 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 STEAP4Q687X5 459 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 TLDC1Q6P9B6 456 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 TIFABQ6ZNK6 161 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 DPH6Q7L8W6 267 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CCNJLQ8IV13 435 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GSDMBQ8TAX9 411 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 AGAP11Q8TF27 550 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SLC7A6OSQ96CW6 309 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 C7orf26Q96N11 449 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 OLFM3Q96PB7 478 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 TSSK1BQ9BXA7 367 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZC3H7BQ9UGR2 993 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 NME7Q9Y5B8 376 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 NRCAMQ92823 1304 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SLC15A5A6NIM6 579 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 A6NJR5 290 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GPR32O75388 356 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CSDE1O75534 798 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GABBR2O75899 941 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 NPTXRO95502 500 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 MAP2K2P36507 400 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ADCYAP1R1P41586 468 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SERPINB4P48594 390 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SARNPP82979 210 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 FAAP100Q0VG06 881 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SF3A3Q12874 501 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 KRT72Q14CN4 511 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CDO1Q16878 200 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 EFHC1Q5JVL4 640 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 C1orf228Q6PIY5 440 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZNF534Q76KX8 674 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 BNIPLQ7Z465 357 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CLNKQ7Z7G1 428 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ACOT1Q86TX2 421 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 C12orf29Q8N999 325 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ACMSDQ8TDX5 336 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SKA1Q96BD8 255 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SERAC1Q96JX3 654 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SIGLEC10Q96LC7 697 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZMAT2Q96NC0 199 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 MTMR10Q9NXD2 777 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 KANSL3Q9P2N6 904 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 SLC17A7Q9P2U7 560 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZFP69BQ9UJL9 534 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
CCDC172-201ENST00000333254 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 ZNF638Q14966 1978 aaKnown RBP11.14□□□□□ -0.63
CCDC172-201ENST00000333254 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
CCDC172-201ENST00000333254 COPEO14579 308 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 BIRC5O15392 142 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 DAB1O75553 588 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 DGKIO75912 1065 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 F2P00734 622 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 DARSP14868 501 aaKnown RBP11.13□□□□□ -0.63
CCDC172-201ENST00000333254 RGS7P49802 495 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 AIF1P55008 147 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 CA9Q16790 459 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 RAB6CQ53S08 254 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms