RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RCOR2Q8IZ40 523 aa24.25■■□□□ 1.47
TSEN54-201ENST00000333213 HSPH1Q92598 858 aa24.25■■□□□ 1.47
TSEN54-201ENST00000333213 HEMGNQ9BXL5 484 aa24.25■■□□□ 1.47
TSEN54-201ENST00000333213 PIGVQ9NUD9 493 aa24.25■■□□□ 1.47
TSEN54-201ENST00000333213 DDX56Q9NY93 547 aaKnown RBP24.25■■□□□ 1.47
TSEN54-201ENST00000333213 MTUS1Q9ULD2 1270 aa24.25■■□□□ 1.47
TSEN54-201ENST00000333213 PLXNA3P51805 1871 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 A0A1W2PQH9 124 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 LRRD1A4D1F6 860 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 KRIT1O00522 736 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 FSCN2O14926 492 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 KRT10P13645 584 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 ARSEP51690 589 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 CA9Q16790 459 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 CCDC185Q8N715 623 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 SLC7A14Q8TBB6 771 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 SPPL3Q8TCT6 385 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 FBXO44Q9H4M3 255 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 CYP4F11Q9HBI6 524 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 GPATCH2LQ9NWQ4 482 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 STK39Q9UEW8 545 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 STAP1Q9ULZ2 295 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 TNRC18O15417 2968 aaPredicted RBP24.24■■□□□ 1.47
TSEN54-201ENST00000333213 ZNF638Q14966 1978 aaKnown RBP24.24■■□□□ 1.47
TSEN54-201ENST00000333213 GBF1Q92538 1859 aa24.24■■□□□ 1.47
TSEN54-201ENST00000333213 SYNJ2BP-COX16A0A087WUM0 186 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 CA3P07451 260 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 KDELR1P24390 212 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 CDKN2BP42772 138 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 TUFMP49411 452 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 RPL10AP62906 217 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 MRPS25P82663 173 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 KLF1Q13351 362 aaPredicted RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 ZC3H12AQ5D1E8 599 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 WDR93Q6P2C0 686 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 SPOCD1Q6ZMY3 1216 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 TMC7Q7Z402 723 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 FAM131BQ86XD5 332 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 MMGT1Q8N4V1 131 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 SNRNP25Q9BV90 132 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 OSBPL8Q9BZF1 889 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 WDR6Q9NNW5 1121 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 COX16Q9P0S2 106 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 GMIPQ9P107 970 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 CSPG5O95196 566 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 NME3Q13232 169 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 KCTD19Q17RG1 926 aaPredicted RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 BEND5Q7L4P6 421 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 RBM41Q96IZ5 413 aaKnown RBP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 TCF25Q9BQ70 676 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 PLVAPQ9BX97 442 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 ANLNQ9NQW6 1124 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 TMPRSS4Q9NRS4 437 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.23■■□□□ 1.47
TSEN54-201ENST00000333213 HSFX1Q9UBD0 423 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 NUDT5Q9UKK9 219 aa24.23■■□□□ 1.47
TSEN54-201ENST00000333213 SLC38A8A6NNN8 435 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 C5orf67F2Z3F1 127 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 I6L893 689 aaPredicted RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 POLR3GO15318 223 aaPredicted RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 CXCL14O95715 111 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 MCM3P25205 808 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 YWHAQP27348 245 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 TAF10Q12962 218 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 EIF4EBP2Q13542 120 aaPredicted RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 CAMK1Q14012 370 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 TAZQ16635 292 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 BOLA3Q53S33 107 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 MON1AQ86VX9 555 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 PRELID2Q8N945 189 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 POF1BQ8WVV4 589 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 PGAP3Q96FM1 320 aaPredicted RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 ABCC13Q9NSE7 274 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 LZTS1Q9Y250 596 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 HIDE1A8MVS5 230 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 RDXP35241 583 aaKnown RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 DEUP1Q05D60 604 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 TAC4Q86UU9 113 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 DQX1Q8TE96 717 aaKnown RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 NAP1L3Q99457 506 aaPredicted RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 LRRC1Q9BTT6 524 aa24.22■■□□□ 1.47
TSEN54-201ENST00000333213 DDX47Q9H0S4 455 aaKnown RBP24.22■■□□□ 1.47
TSEN54-201ENST00000333213 hCG_1818297A0A087WSY0 165 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.21■■□□□ 1.47
TSEN54-201ENST00000333213 RTN3O95197 1032 aaPredicted RBP24.21■■□□□ 1.47
TSEN54-201ENST00000333213 IGLV3-25P01717 112 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 SPATA31D3P0C874 917 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 DESP17661 470 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 CA8P35219 290 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 PBX2P40425 430 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 BTBD8Q5XKL5 378 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 SPATA31D4Q6ZUB0 917 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 KCTD6Q8NC69 237 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 TEKT4Q8WW24 435 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 KRT12Q99456 494 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 NCAPGQ9BPX3 1015 aa24.21■■□□□ 1.47
TSEN54-201ENST00000333213 YBX2Q9Y2T7 364 aaKnown RBP24.21■■□□□ 1.47
TSEN54-201ENST00000333213 YIPF1Q9Y548 306 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms