RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 CLIC5Q9NZA1 410 aa17.13■□□□□ 0.33
LINC00313-201ENST00000332440 FBXO10Q9UK96 956 aa17.13■□□□□ 0.33
LINC00313-201ENST00000332440 PCDH15Q96QU1 1955 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 PRRT4C9JH25 899 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 CETN3O15182 167 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 CD44P16070 742 aaKnown RBP17.12■□□□□ 0.33
LINC00313-201ENST00000332440 BMP6P22004 513 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 TOGARAM2Q6ZUX3 1019 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 TMEM176AQ96HP8 235 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
LINC00313-201ENST00000332440 LNP1A1A4G5 178 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 PENKP01210 267 aaPredicted RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 EPB41P11171 864 aaKnown RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 ELF2Q15723 593 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 AASDHQ4L235 1098 aaPredicted RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 PKDCCQ504Y2 493 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 USP39Q53GS9 565 aaKnown RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 STPG1Q5TH74 334 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 EGFLAMQ63HQ2 1017 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 RBBP8NLQ8NC74 664 aaPredicted RBP17.11■□□□□ 0.33
LINC00313-201ENST00000332440 RLN3Q8WXF3 142 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 ACOX2Q99424 681 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 GABRG3Q99928 467 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 DEC1Q9P2X7 70 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 SPEGQ15772 3267 aa17.11■□□□□ 0.33
LINC00313-201ENST00000332440 CEP192Q8TEP8 1941 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 GFRA2O00451 464 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 GABBR2O75899 941 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 TYRP14679 529 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 GABRG2P18507 467 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 PSEN1P49768 467 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 CUL2Q13617 745 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 ANO4Q32M45 955 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 C10orf76Q5T2E6 689 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 PM20D1Q6GTS8 502 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 C11orf74Q86VG3 221 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
LINC00313-201ENST00000332440 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 ZNF513Q8N8E2 541 aaPredicted RBP17.1■□□□□ 0.33
LINC00313-201ENST00000332440 ANKRD52Q8NB46 1076 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 ZSWIM1Q9BR11 485 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 NACA2Q9H009 215 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 NAGPAQ9UK23 515 aa17.1■□□□□ 0.33
LINC00313-201ENST00000332440 CKAP5Q14008 2032 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 TCRBV21S2A2A0A5A6 115 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 PATE3B3GLJ2 98 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 NEDD8-MDP1E9PL57 170 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 PMM2O15305 246 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 STX10O60499 249 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 CAVIN2O95810 425 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 FKBP3Q00688 224 aaKnown RBP17.09■□□□□ 0.33
LINC00313-201ENST00000332440 CREB5Q02930 508 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 C10orf120Q5SQS8 335 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
LINC00313-201ENST00000332440 CNTNAP3BQ96NU0 1288 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
LINC00313-201ENST00000332440 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 CNTNAP3Q9BZ76 1288 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
LINC00313-201ENST00000332440 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
LINC00313-201ENST00000332440 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 CDX4O14627 284 aaPredicted RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 PTGER3P43115 390 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 PDE4CQ08493 712 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 ENPP2Q13822 863 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 TTI2Q6NXR4 508 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 TPGS1Q6ZTW0 290 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 C12orf50Q8NA57 414 aaPredicted RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 NDRG1Q92597 394 aaKnown RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 POLMQ9NP87 494 aaPredicted RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 TMEM74BQ9NUR3 256 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 WDR35Q9P2L0 1181 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 LSM7Q9UK45 103 aaKnown RBP17.08■□□□□ 0.32
LINC00313-201ENST00000332440 MAN1B1Q9UKM7 699 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 TSPAN16Q9UKR8 245 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 CLEC4EQ9ULY5 219 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 SLC27A6Q9Y2P4 619 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 ZZEF1O43149 2961 aa17.08■□□□□ 0.32
LINC00313-201ENST00000332440 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
LINC00313-201ENST00000332440 O00370 1275 aa17.07■□□□□ 0.32
LINC00313-201ENST00000332440 XPO1O14980 1071 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms